RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 CA10Q9NS85 328 aa12.05□□□□□ -0.48
PTPRE-203ENST00000442830 CRNNQ9UBG3 495 aaPredicted RBP12.05□□□□□ -0.48
PTPRE-203ENST00000442830 RCE1Q9Y256 329 aa12.05□□□□□ -0.48
PTPRE-203ENST00000442830 IFT52Q9Y366 437 aa12.05□□□□□ -0.48
PTPRE-203ENST00000442830 DSPPQ9NZW4 1301 aa12.05□□□□□ -0.48
PTPRE-203ENST00000442830 ZC3H12DA2A288 527 aaKnown RBP12.04□□□□□ -0.48
PTPRE-203ENST00000442830 FRS3O43559 492 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 AKR7A3O95154 331 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 AHSA1O95433 338 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 ANP32DO95626 131 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 TFPTP0C1Z6 253 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 ZCCHC18P0CG32 403 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 IDO1P14902 403 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 CREB1P16220 341 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 NCF2P19878 526 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-203ENST00000442830 FOXG1P55316 489 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-203ENST00000442830 SLC25A3Q00325 362 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 C1orf140Q5VVS0 124 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 ANKRD16Q6P6B7 361 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 NUP37Q8NFH4 326 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 IL17RDQ8NFM7 739 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 MFSD8Q8NHS3 518 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 NEU4Q8WWR8 484 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-203ENST00000442830 NANOS1Q8WY41 292 aaKnown RBP12.04□□□□□ -0.48
PTPRE-203ENST00000442830 AURKBQ96GD4 344 aaPredicted RBP12.04□□□□□ -0.48
PTPRE-203ENST00000442830 RAD21L1Q9H4I0 556 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 ZNF442Q9H7R0 627 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 PCDHB14Q9Y5E9 798 aa12.04□□□□□ -0.48
PTPRE-203ENST00000442830 IGHV1-18A0A0C4DH31 117 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 A0A0G2JPF8 293 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 LOC100289279A0A1B0GTE1 492 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 HNRNPCL2B2RXH8 293 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 HNRNPCL3B7ZW38 293 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 HDAC3O15379 428 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 OR2T1O43869 369 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 HNRNPCL1O60812 293 aaKnown RBP12.03□□□□□ -0.48
PTPRE-203ENST00000442830 HNRNPCL4P0DMR1 293 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 CDH2P19022 906 aaPredicted RBP12.03□□□□□ -0.48
PTPRE-203ENST00000442830 PCMT1P22061 227 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 DSTNP60981 165 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 UFM1P61960 85 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 GGTLC2Q14390 218 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 IQCCQ4KMZ1 466 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 HIKESHIQ53FT3 197 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 LIPNQ5VXI9 398 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 CREB3L2Q70SY1 520 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 HMGN2P46Q86SG4 172 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 CADM2Q8N3J6 435 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 ANKRD27Q96NW4 1050 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 ZNF385AQ96PM9 386 aaKnown RBP12.03□□□□□ -0.48
PTPRE-203ENST00000442830 SORCS2Q96PQ0 1159 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 SPATA9Q9BWV2 254 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 C20orf27Q9GZN8 174 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 PLK3Q9H4B4 646 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 C12orf10Q9HB07 376 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 ADPRHL2Q9NX46 363 aa12.03□□□□□ -0.48
PTPRE-203ENST00000442830 ZNF443Q9Y2A4 671 aaPredicted RBP12.03□□□□□ -0.48
PTPRE-203ENST00000442830 RPL36A-HNRNPH2H7BZ11 118 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 SDHDO14521 159 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 SLC43A1O75387 559 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 IGKV3-15P01624 115 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 IGLV1-44P01699 117 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 ALDOCP09972 364 aaKnown RBP12.02□□□□□ -0.49
PTPRE-203ENST00000442830 ZNF23P17027 643 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 ZNF43P17038 809 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 BGNP21810 368 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 ACAA2P42765 397 aaKnown RBP12.02□□□□□ -0.49
PTPRE-203ENST00000442830 CRATP43155 626 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 IDH3GP51553 393 aaPredicted RBP12.02□□□□□ -0.49
PTPRE-203ENST00000442830 NAAAQ02083 359 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 MFSD13AQ14CX5 517 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 MST1LQ2TV78 715 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 PDCD4Q53EL6 469 aaKnown RBP12.02□□□□□ -0.49
PTPRE-203ENST00000442830 HHATQ5VTY9 493 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 NIPAL3Q6P499 406 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 ZNF836Q6ZNA1 936 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 SNX32Q86XE0 403 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 HTRA1Q92743 480 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 HPS1Q92902 700 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 ITCHQ96J02 903 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 VRK1Q99986 396 aaPredicted RBP12.02□□□□□ -0.49
PTPRE-203ENST00000442830 THAP1Q9NVV9 213 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 ZIM2Q9NZV7 527 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 GPR45Q9Y5Y3 372 aa12.02□□□□□ -0.49
PTPRE-203ENST00000442830 TMEM229AB2RXF0 380 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 FZD7O75084 574 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 NPIPB7O75200 414 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 SLC22A3O75751 556 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 LGI1O95970 557 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 BCHEP06276 602 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 OR4A8P0C604 315 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 GKN3PP0CG01 181 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 IGFBP5P24593 272 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 ARR3P36575 388 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 CDKN2CP42773 168 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 SELENOPP49908 381 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 P2RY4P51582 365 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 CHN2P52757 468 aa12.01□□□□□ -0.49
PTPRE-203ENST00000442830 POU3F1Q03052 451 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms