RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ZNF691Q5VV52 312 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 C1orf94Q6P1W5 598 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF782Q6ZMW2 699 aaPredicted RBP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 PPP1R32Q7Z5V6 425 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 POGLUT1Q8NBL1 392 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 M1APQ8TC57 530 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 GRHL3Q8TE85 626 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 ST8SIA2Q92186 375 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 RPL3LQ92901 407 aaKnown RBP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 MYDGFQ969H8 173 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 ARSGQ96EG1 525 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 DMRTB1Q96MA1 342 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 TMEM68Q96MH6 324 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 MMP25Q9NPA2 562 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 KRCC1Q9NPI7 259 aaPredicted RBP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 EXOSC3Q9NQT5 275 aaKnown RBP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 PCDHB16Q9NRJ7 776 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 NDRG4Q9ULP0 352 aaKnown RBP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 A0A0B4J2E0 115 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 A0A1B0GX12 115 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 I3L521 148 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 SOCS6O14544 535 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 TM4SF5O14894 197 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 CHP2O43745 196 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 SLC22A5O76082 557 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 OSMP13725 252 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 GSTM3P21266 225 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 RBMS1P29558 406 aaKnown RBP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 DLSTP36957 453 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 CCR4P51679 360 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 LSM11P83369 360 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 IL5RAQ01344 420 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 PRKCDQ05655 676 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 SKP2Q13309 424 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 RAPSNQ13702 412 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 MBOAT2Q6ZWT7 520 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 TMEM255BQ8WV15 326 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 AKAP1Q92667 903 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 TMCO6Q96DC7 493 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 HRASLS5Q96KN8 279 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 PITX2Q99697 317 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 PRSS27Q9BQR3 290 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 NXF2Q9GZY0 626 aaKnown RBP7.38□□□□□ -1.23
CCDC39-201ENST00000442201 LDAHQ9H6V9 325 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF160Q9HCG1 818 aa7.38□□□□□ -1.23
CCDC39-201ENST00000442201 ARHGEF9O43307 516 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 HCRTR2O43614 444 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF354AO60765 605 aaPredicted RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 OR2J2O76002 312 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ZP3P21754 424 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 POU1F1P28069 291 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 POU3F4P49335 361 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CRISP1P54107 249 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ZNF91Q05481 1191 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 LGALS3BPQ08380 585 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ALG10BQ5I7T1 473 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 RBM48Q5RL73 367 aaKnown RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 EEF1A1P5Q5VTE0 462 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 LAMTOR1Q6IAA8 161 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ULK3Q6PHR2 472 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CD300LDQ6UXZ3 194 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 NUP54Q7Z3B4 507 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 MARCH3Q86UD3 253 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 NRMQ8IXM6 262 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 RNF113BQ8IZP6 322 aaKnown RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 OR5M3Q8NGP4 307 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 SETD6Q8TBK2 473 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 GNPDA2Q8TDQ7 276 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 DNAJA4Q8WW22 397 aaPredicted RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 TMEM239Q8WW34 195 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 PHF21AQ96BD5 680 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 HS6ST2Q96MM7 605 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 TINAGL1Q9GZM7 467 aaPredicted RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ING3Q9NXR8 418 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 KLHL21Q9UJP4 597 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 NINQ8N4C6 2090 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 H3BN98 237 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 FADS1O60427 444 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 EIF4E2O60573 245 aaKnown RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 LYPD3O95274 346 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ANGPTL1O95841 491 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 C1QBP02746 253 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CHMP24386 653 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 SLC6A8P48029 635 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 FBXW4P57775 412 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 RAB14P61106 215 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 ISL1P61371 349 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 RAC1P63000 192 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CD47Q08722 323 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 TSPAN31Q12999 210 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CBLN3Q6UW01 205 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 CFAP77Q6ZQR2 320 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 PRICKLE2Q7Z3G6 844 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 FAM83FQ8NEG4 500 aaPredicted RBP7.37□□□□□ -1.23
CCDC39-201ENST00000442201 PHOX2BQ99453 314 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 LAT2Q9GZY6 243 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 TEKT2Q9UIF3 430 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 PCDHGB1Q9Y5G3 927 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 TBX1O43435 398 aa7.37□□□□□ -1.23
CCDC39-201ENST00000442201 OIP5O43482 229 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms