RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 OR5T2Q8NGG2 359 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 ACTRT3Q9BYD9 372 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 ESRP2Q9H6T0 727 aaKnown RBP18.64■□□□□ 0.57
SHOX2-203ENST00000441443 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 IGKV1-8A0A0C4DH67 115 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 OR5K4A6NMS3 321 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 OR1Q1Q15612 314 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 GIMAP5Q96F15 307 aa18.64■□□□□ 0.57
SHOX2-203ENST00000441443 TMEM272A0A1B0GTI8 110 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 ZNF879B4DU55 563 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 SMAD9O15198 467 aaKnown RBP18.63■□□□□ 0.57
SHOX2-203ENST00000441443 SNAPC5O75971 98 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 AQP8O94778 261 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 HIST1H1TP22492 207 aaPredicted RBP18.63■□□□□ 0.57
SHOX2-203ENST00000441443 NDUFS1P28331 727 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 HOXA1P49639 335 aaPredicted RBP18.63■□□□□ 0.57
SHOX2-203ENST00000441443 C1orf53Q5VUE5 145 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 TSSK4Q6SA08 328 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.63■□□□□ 0.57
SHOX2-203ENST00000441443 OR6K3Q8NGY3 331 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 NUS1Q96E22 293 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 ADAT1Q9BUB4 502 aaKnown RBP18.63■□□□□ 0.57
SHOX2-203ENST00000441443 EYSQ5T1H1 3165 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 ACOT7O00154 380 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 GPR31O00270 319 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 F3P13726 295 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 AKR1C2P52895 323 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 TAS2R20P59543 309 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 GPR85P60893 370 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 AKR1C1Q04828 323 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 PLA2G7Q13093 441 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 PCGF3Q3KNV8 242 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 OR52E2Q8NGJ4 325 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 OR4K13Q8NH42 304 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 ARRDC3Q96B67 414 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 UTP23Q9BRU9 249 aaKnown RBP18.63■□□□□ 0.57
SHOX2-203ENST00000441443 DNTTIP1Q9H147 329 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 C17orf113A0A1B0GUU1 675 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 MEIS3P1A6NDR6 274 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 C6P13671 934 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 RANBP3LQ86VV4 465 aaPredicted RBP18.63■□□□□ 0.57
SHOX2-203ENST00000441443 NRSN1Q8IZ57 195 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 OR8K3Q8NH51 312 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 GRHL3Q8TE85 626 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 WNT2BQ93097 391 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 TNFRSF13CQ96RJ3 184 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 ZNF559Q9BR84 538 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 GPR174Q9BXC1 333 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 CHST6Q9GZX3 395 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 SYNPO2LQ9H987 977 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 CACYBPQ9HB71 228 aaKnown RBP18.63■□□□□ 0.57
SHOX2-203ENST00000441443 V9GY05 133 aa18.63■□□□□ 0.57
SHOX2-203ENST00000441443 SCN3AQ9NY46 2000 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 TSPAN11A1L157 253 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 SCAMP1O15126 338 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 BCL6P41182 706 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 TCEA2Q15560 299 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 SLC48A1Q6P1K1 146 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 CDK20Q8IZL9 346 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 OR4C16Q8NGL9 310 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 OR5K2Q8NHB8 316 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 MOAP1Q96BY2 351 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 SLC25A32Q9H2D1 315 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 MTHFD2LQ9H903 347 aaPredicted RBP18.62■□□□□ 0.57
SHOX2-203ENST00000441443 C2orf42Q9NWW7 574 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 DOCK9Q9BZ29 2069 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 H0YC42 278 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 SPINT1O43278 529 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 CLEC3AO75596 197 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 DDX6P26196 483 aaKnown RBP eCLIP18.62■□□□□ 0.57
SHOX2-203ENST00000441443 GRPRP30550 384 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 STARP49675 285 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 HTRA4P83105 476 aaPredicted RBP18.62■□□□□ 0.57
SHOX2-203ENST00000441443 SERTAD2Q14140 314 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 NDUFAF6Q330K2 333 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 EID2Q8N6I1 236 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 TMEM185AQ8NFB2 350 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 OR7G2Q8NG99 324 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 CMTM3Q96MX0 182 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 WDR13Q9H1Z4 485 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 TSPAN10Q9H1Z9 355 aaPredicted RBP18.62■□□□□ 0.57
SHOX2-203ENST00000441443 FANCFQ9NPI8 374 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 MEPEQ9NQ76 525 aaPredicted RBP18.62■□□□□ 0.57
SHOX2-203ENST00000441443 PRDM7Q9NQW5 492 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 ZNF230Q9UIE0 474 aaPredicted RBP18.62■□□□□ 0.57
SHOX2-203ENST00000441443 CES1P1Q9UKY3 287 aa18.62■□□□□ 0.57
SHOX2-203ENST00000441443 TBC1D3BA6NDS4 549 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 MECP2P51608 486 aaKnown RBP18.61■□□□□ 0.57
SHOX2-203ENST00000441443 RBMS2Q15434 407 aaKnown RBP18.61■□□□□ 0.57
SHOX2-203ENST00000441443 YOD1Q5VVQ6 348 aaPredicted RBP18.61■□□□□ 0.57
SHOX2-203ENST00000441443 RPL22L1Q6P5R6 122 aaKnown RBP18.61■□□□□ 0.57
SHOX2-203ENST00000441443 AMZ2Q86W34 360 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 MS4A6EQ96DS6 147 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 MENTQ9BUN1 341 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 H3BSH0 61 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 ITPKBP27987 946 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 C4orf46Q504U0 113 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 BEX5Q5H9J7 111 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 ZNRF4Q8WWF5 429 aa18.61■□□□□ 0.57
SHOX2-203ENST00000441443 NSMAFQ92636 917 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms