RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 TAS2R60P59551 318 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 HTRA4P83105 476 aaPredicted RBP10.8□□□□□ -0.68
SMPD4-209ENST00000439886 KCNAB1Q14722 419 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 OTPQ5XKR4 325 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 FIGNL1Q6PIW4 674 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 ZC3H14Q6PJT7 736 aaKnown RBP10.8□□□□□ -0.68
SMPD4-209ENST00000439886 MTSS1LQ765P7 747 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 SPAG16Q8N0X2 631 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 TRAM1L1Q8N609 369 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 ZNF461Q8TAF7 563 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 CDS1Q92903 461 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 TCEAL4Q96EI5 215 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 SLITRK2Q9H156 845 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 KLHL31Q9H511 634 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 ABRACLQ9P1F3 81 aa10.8□□□□□ -0.68
SMPD4-209ENST00000439886 NOP16Q9Y3C1 178 aaKnown RBP10.8□□□□□ -0.68
SMPD4-209ENST00000439886 NPC1O15118 1278 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 SC5DO75845 299 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 ANXA2P07355 339 aaKnown RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 FBP1P09467 338 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 SBK2P0C263 348 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 UGT2B7P16662 529 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 CSNK2A2P19784 350 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 MPIP34949 423 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 PABPC1L2AQ5JQF8 200 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 TSSK4Q6SA08 328 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 GLDNQ6ZMI3 551 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 THSD4Q6ZMP0 1018 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 SLC16A11Q8NCK7 471 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 PAQR8Q8TEZ7 354 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 CASTOR1Q8WTX7 329 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 FBXO17Q96EF6 278 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 MRPS24Q96EL2 167 aaKnown RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 ZNF75AQ96N20 296 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 UBL7Q96S82 380 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 TM7SF3Q9NS93 570 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 KCNAB3O43448 404 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 LCMT2O60294 686 aaKnown RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 PAK4O96013 591 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 CDK2P24941 298 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 BMP8BP34820 402 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 BSGP35613 385 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 CBFBQ13951 182 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 MAPK14Q16539 360 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 EIF2S3LQ2VIR3 472 aaKnown RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 BMP8AQ7Z5Y6 402 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 ZCCHC10Q8TBK6 192 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 SCLYQ96I15 445 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 WDR90Q96KV7 1748 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 PLXNA4Q9HCM2 1894 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 HMX1Q9NP08 348 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 ATG4BQ9Y4P1 393 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 TRAV18A0A075B6X5 111 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 CLDN4O14493 209 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 AGPAT2O15120 278 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 RRP8O43159 456 aaKnown RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 TMIGD3P0DMS9 266 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 CERS1P27544 350 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 FAUP35544 74 aaKnown RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 PTGFRP43088 359 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 PRLHRP49683 370 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 RGS19P49795 217 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 GUCA2AQ02747 115 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 OR4C11Q6IEV9 310 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 OVCH2Q7RTZ1 564 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 OR51S1Q8NGJ8 323 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 OR2A12Q8NGT7 310 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 OR1S1Q8NH92 325 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 HSPA12BQ96MM6 686 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 C1QTNF2Q9BXJ5 285 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 TSPAN10Q9H1Z9 355 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 C6orf106Q9H6K1 298 aaPredicted RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 ZMAT3Q9HA38 289 aaKnown RBP10.79□□□□□ -0.68
SMPD4-209ENST00000439886 PIPOXQ9P0Z9 390 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 WASF3Q9UPY6 502 aa10.79□□□□□ -0.68
SMPD4-209ENST00000439886 A0A1B0GUH1 482 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 TMEM200CA6NKL6 621 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 GMFGO60234 142 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 HIST1H2ABP04908 130 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 C6P13671 934 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 TIMP2P16035 220 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 MAKP20794 623 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 AK4P27144 223 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-209ENST00000439886 PPM1FP49593 454 aaPredicted RBP10.78□□□□□ -0.68
SMPD4-209ENST00000439886 FLT3LGP49771 235 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 METAP1P53582 386 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 NRG3P56975 720 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 TAS2R43P59537 309 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 UBE2NLQ5JXB2 153 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 KCTD9Q7L273 389 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 HIST3H2AQ7L7L0 130 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 ZNF485Q8NCK3 441 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 ELP5Q8TE02 316 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 HIST1H2ACQ93077 130 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 TNFRSF13CQ96RJ3 184 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 C7orf50Q9BRJ6 194 aaKnown RBP10.78□□□□□ -0.68
SMPD4-209ENST00000439886 MS4A8Q9BY19 250 aa10.78□□□□□ -0.68
SMPD4-209ENST00000439886 ZFP57Q9NU63 452 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms