RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SMIM19Q96E16 107 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 PGLYRP3Q96LB9 341 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 SOSTQ9BQB4 213 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 ALG12Q9BV10 488 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 NMNAT2Q9BZQ4 307 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 VN1R1Q9GZP7 353 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 WWTR1Q9GZV5 400 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 C11orf54Q9H0W9 315 aaPredicted RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 ZNF768Q9H5H4 540 aaKnown RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 PPP1R3EQ9H7J1 279 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 MMP25Q9NPA2 562 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 RPRD1BQ9NQG5 326 aaKnown RBP9.51□□□□□ -0.89
CPNE1-218ENST00000439806 FGF21Q9NSA1 209 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 RXFP3Q9NSD7 469 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 MKL2Q9ULH7 1088 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 COPS3Q9UNS2 423 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 MOKQ9UQ07 419 aa9.51□□□□□ -0.89
CPNE1-218ENST00000439806 EXPH5Q8NEV8 1989 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 TRBV2A0A0J9YWF9 115 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 K7ESF4 209 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 TFECO14948 347 aaPredicted RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 KHNYNO15037 678 aaKnown RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 SEC14L5O43304 696 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 SCO2O43819 266 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 GPRIN2O60269 458 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 CDC40O60508 579 aaKnown RBP eCLIP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 GATBO75879 557 aaKnown RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 HLA-DQB1P01920 261 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 CD1AP06126 327 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 ASAH2BP0C7U1 165 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 ELK1P19419 428 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 SDHAP31040 664 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 PSMB10P40306 273 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 CDKN2AP42771 156 aaKnown RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 DHPSP49366 369 aaPredicted RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 SIRPAP78324 504 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 ACY1Q03154 408 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 RPL18Q07020 188 aaKnown RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 CBFBQ13951 182 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 P2RY14Q15391 338 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 SF3A2Q15428 464 aaKnown RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 NR0B2Q15466 257 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 CCDC58Q4VC31 144 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 EMC4Q5J8M3 183 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 FAM27D1Q5T7N8 215 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 LYSMD4Q5XG99 296 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 ZNF57Q68EA5 555 aaPredicted RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 GPR139Q6DWJ6 353 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 POMZP3Q6PJE2 187 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 IL20RBQ6UXL0 311 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 SLC16A9Q7RTY1 509 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 NUP54Q7Z3B4 507 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 RABEPKQ7Z6M1 372 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 MARCH3Q86UD3 253 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 PLPP5Q8NEB5 264 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 OR1N1Q8NGS0 311 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 OR13C5Q8NGS8 318 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 TRMT10AQ8TBZ6 339 aaKnown RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 ZNF501Q96CX3 271 aaPredicted RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 PELI1Q96FA3 418 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 ADAD1Q96M93 576 aaKnown RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 MOGAT1Q96PD6 335 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 DDOQ99489 341 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 ELF4Q99607 663 aaPredicted RBP9.5□□□□□ -0.89
CPNE1-218ENST00000439806 NUDT22Q9BRQ3 303 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 HDHD2Q9H0R4 259 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 MMP28Q9H239 520 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 PRO3102Q9H379 93 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 FKRPQ9H9S5 495 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 GRHPRQ9UBQ7 328 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 ZNF221Q9UK13 617 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 RASD1Q9Y272 281 aa9.5□□□□□ -0.89
CPNE1-218ENST00000439806 TNRC6BQ9UPQ9 1833 aaKnown RBP9.49□□□□□ -0.89
CPNE1-218ENST00000439806 FER1L5A0AVI2 2057 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 TRAV36DV7A0A075B6V5 113 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 TRAV1-2A0A0B4J238 106 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 MEIOCA2RUB1 952 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 FAM171A2A8MVW0 826 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 ALG1L2C9J202 215 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 PDCD5O14737 125 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 MAGEB4O15481 346 aaPredicted RBP9.49□□□□□ -0.89
CPNE1-218ENST00000439806 FLRT2O43155 660 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 SC5DO75845 299 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 TXNDC12O95881 172 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 BGLAPP02818 100 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 F13BP05160 661 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 EIF4EP06730 217 aaKnown RBP9.49□□□□□ -0.89
CPNE1-218ENST00000439806 DCNP07585 359 aaKnown RBP9.49□□□□□ -0.89
CPNE1-218ENST00000439806 RBMS1P29558 406 aaKnown RBP9.49□□□□□ -0.89
CPNE1-218ENST00000439806 GRPRP30550 384 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 UQCRC1P31930 480 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 P2RX1P51575 399 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 OR10A3P58181 314 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 LTBQ06643 244 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 DMWDQ09019 674 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 SLC6A19Q695T7 634 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 TMEM71Q6P5X7 295 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 PLET1Q6UQ28 207 aa9.49□□□□□ -0.89
CPNE1-218ENST00000439806 LANCL3Q6ZV70 420 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms