RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 B3GALT2O43825 422 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 OR6A2O95222 327 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 AGR2O95994 175 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 THY1P04216 161 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 AMY2AP04746 511 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 DBIP07108 87 aaKnown RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 RHOP08100 348 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 LAG3P18627 525 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 VIPR2P41587 438 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 ADAM8P78325 824 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 BLOC1S1P78537 153 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 SHC2P98077 582 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 CDK3Q00526 305 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 RBMS2Q15434 407 aaKnown RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 ETFDHQ16134 617 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 RPL13AP3Q6NVV1 102 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 RPL22L1Q6P5R6 122 aaKnown RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 GLB1L2Q8IW92 636 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 BVESQ8NE79 360 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 AHCYL2Q96HN2 611 aaKnown RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 KLHL15Q96M94 604 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 C12orf57Q99622 126 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 PTDSS2Q9BVG9 487 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 ANKRD19PQ9H560 264 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 OR2S2Q9NQN1 319 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 PHPT1Q9NRX4 125 aaPredicted RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 NCDNQ9UBB6 729 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 ADAM29Q9UKF5 820 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 GPR34Q9UPC5 381 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 PLXNA4Q9HCM2 1894 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 TBC1D3KA0A087X1G2 549 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 A0A1B0GTH9 108 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 TBC1D3FA6NER0 549 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 TRIM77I1YAP6 450 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 IMPA2O14732 288 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 FGF18O76093 207 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 NFATC1O95644 943 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 NUDT14O95848 222 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 OLFM2O95897 454 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 S100A9P06702 114 aaKnown RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 ACRP10323 421 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 PGDP52209 483 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 POU4F2Q12837 409 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 ARHGAP19Q14CB8 494 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 ZNHIT3Q15649 155 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 NHLRC3Q5JS37 347 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 TBC1D3GQ6DHY5 549 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 DMKNQ6E0U4 476 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 MAMSTRQ6ZN01 415 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 ZNF619Q8N2I2 560 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 INO80EQ8NBZ0 244 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 CLRN3Q8NCR9 226 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 OR2AK2Q8NG84 335 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 OR5AK2Q8NH90 309 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 NXPE3Q969Y0 559 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 KXD1Q9BQD3 176 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 NKX6-2Q9C056 277 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 EPHX3Q9H6B9 360 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 C14orf105Q9NVL8 296 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 KCMF1Q9P0J7 381 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 LAMP5Q9UJQ1 280 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 TP53BP1Q12888 1972 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 A0A1B0GWA3 101 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 NDUFB2O95178 105 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 HIST1H2ABP04908 130 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 S100A6P06703 90 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 OR2T7P0C7T2 308 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 GABRA1P14867 456 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 EPCAMP16422 314 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 GALP22466 123 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 CST5P28325 142 aaPredicted RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 NDUFS1P28331 727 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 CCKBRP32239 447 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 AQP2P41181 271 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 TRA2BP62995 288 aaKnown RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 DEFB103AP81534 67 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 DCAF12L2Q5VW00 463 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 SLC6A19Q695T7 634 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 HIST3H2AQ7L7L0 130 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 OR4C16Q8NGL9 310 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 OR2A1Q8NGT9 310 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 OR2T27Q8NH04 317 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 PAQR8Q8TEZ7 354 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 HIST1H2ACQ93077 130 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 PGLYRP3Q96LB9 341 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 PELOQ9BRX2 385 aaKnown RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 ADAT1Q9BUB4 502 aaKnown RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 KCNK15Q9H427 330 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 TMEM231Q9H6L2 316 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.33□□□□□ -1.08
COPB1-202ENST00000439561 RXFP3Q9NSD7 469 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 APOBEC3BQ9UH17 382 aaKnown RBP8.33□□□□□ -1.08
COPB1-202ENST00000439561 SIGLEC7Q9Y286 467 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 ZNF281Q9Y2X9 895 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 BHLHE40O14503 412 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 ATG12O94817 140 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 TACSTD2P09758 323 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 HTR2AP28223 471 aa8.33□□□□□ -1.08
COPB1-202ENST00000439561 PRSS3P35030 304 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms