RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 FANK1Q8TC84 345 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ARRDC3Q96B67 414 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 GIMAP5Q96F15 307 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 DERL3Q96Q80 235 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 ENKD1Q9H0I2 346 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 KLHL28Q9NXS3 571 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 WSB2Q9NYS7 404 aaPredicted RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 SLC6A5Q9Y345 797 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ANKRD20A5PA0PJZ0 165 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 BHLHE40O14503 412 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 NDUFS4O43181 175 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 PRKRAO75569 313 aaKnown RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 SPDEFO95238 335 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 FUT1P19526 365 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 NTSP30990 170 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ARHGDIBP52566 201 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 OC90Q02509 493 aaPredicted RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 TGM3Q08188 693 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ELAVL3Q14576 367 aaKnown RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 AGBL4Q5VU57 503 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 FAM199XQ6PEV8 388 aaPredicted RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 C17orf64Q86WR6 236 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 RELL2Q8NC24 303 aaPredicted RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 OR5M1Q8NGP8 315 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 SMPDL3BQ92485 455 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 AIF1LQ9BQI0 150 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 DPH1Q9BZG8 443 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 FBRSQ9HAH7 460 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ADGRL4Q9HBW9 690 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ZNF304Q9HCX3 659 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 PARD6AQ9NPB6 346 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 NFKBIL1Q9UBC1 381 aaPredicted RBP7.87□□□□□ -1.15
HPS4-206ENST00000439453 SLC7A7Q9UM01 511 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 CYP8B1Q9UNU6 501 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 PLCL2Q9UPR0 1127 aa7.87□□□□□ -1.15
HPS4-206ENST00000439453 ARPC4-TTLL3A0A0A6YYG9 625 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 GLOD5A6NK44 160 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 H7C2Y5 167 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 NDUFB6O95139 128 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 OR5F1O95221 314 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 RLN2P04090 185 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 S100A9P06702 114 aaKnown RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 UCHL1P09936 223 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 ZNF35P13682 527 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TIMP2P16035 220 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 MECP2P51608 486 aaKnown RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 H2BFSP57053 126 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 FXYD6P3P58550 94 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 S100A12P80511 92 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 MC2RQ01718 297 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 CST6Q15828 149 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 C2orf68Q2NKX9 166 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 PLA2G2CQ5R387 149 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 UBE3DQ7Z6J8 389 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 C11orf96Q7Z7L8 435 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TRAPPC5Q8IUR0 188 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 SERPINA12Q8IW75 414 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 EID2Q8N6I1 236 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 C1orf216Q8TAB5 229 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 SFXN5Q8TD22 340 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 OR7D2Q96RA2 312 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 MFRPQ9BY79 579 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 SLC25A32Q9H2D1 315 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 ACTR10Q9NZ32 417 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 MRTO4Q9UKD2 239 aaKnown RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 KCNK7Q9Y2U2 307 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TRPM6Q9BX84 2022 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 PRAMEF2O60811 474 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 ERAL1O75616 437 aaKnown RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 CDC123O75794 336 aaPredicted RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 PCDH8O95206 1070 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 VSIG10L2P0DP72 767 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 MST1P26927 711 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 DCTDP32321 178 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 RECQLP46063 649 aaPredicted RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 GDI2P50395 445 aaKnown RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 ERVK-25P63136 954 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 SCRN3Q0VDG4 424 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 KRT33BQ14525 404 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 HES5Q5TA89 166 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 ZNF776Q68DI1 518 aaPredicted RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 OR7E24Q6IFN5 339 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TMEM64Q6YI46 380 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 SSX6Q7RTT6 188 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 SLC25A38Q96DW6 304 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TTTY10Q9BZA0 68 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 DNTTIP1Q9H147 329 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 KRCC1Q9NPI7 259 aaPredicted RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 TAS2R10Q9NYW0 307 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 NDRG3Q9UGV2 375 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TAC3Q9UHF0 121 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 ZFHX2Q9C0A1 2572 aaPredicted RBP7.86□□□□□ -1.15
HPS4-206ENST00000439453 UBE2QL1A1L167 161 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 F5H5P2 479 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 CLUP10909 449 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 BMP7P18075 431 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 TEAD1P28347 426 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 GPR85P60893 370 aa7.86□□□□□ -1.15
HPS4-206ENST00000439453 IL10RAQ13651 578 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms