RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IRX1P78414 480 aaPredicted RBP16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 HOXC5Q00444 222 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 CHRNB3Q05901 458 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 HIKESHIQ53FT3 197 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 GCNT6Q5T4J0 391 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 NIPAL3Q6P499 406 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 B3GLCTQ6Y288 498 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 CREB3L2Q70SY1 520 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 MFSD8Q8NHS3 518 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 SLC35B4Q969S0 331 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 SPDL1Q96EA4 605 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 SPATA5L1Q9BVQ7 753 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 CHST2Q9Y4C5 530 aa16.16■□□□□ 0.18
AC004540.1-201ENST00000439120 TMEM229AB2RXF0 380 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 BMP2P12643 396 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 ETS2P15036 469 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 RPS5P46782 204 aaKnown RBP16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 MRPL19P49406 292 aaKnown RBP16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 SELENOPP49908 381 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 IDH3AP50213 366 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 DSCR9P59020 149 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 UBE2NP61088 152 aaKnown RBP16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 NCALDP61601 193 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 SLC25A3Q00325 362 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 C11orf71Q6IPW1 123 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 BLOC1S3Q6QNY0 202 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 PRIMA1Q86XR5 153 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 NFKBIDQ8NI38 313 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 ALKBH3Q96Q83 286 aaPredicted RBP16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 OBP2BQ9NPH6 170 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 SELENONQ9NZV5 590 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 TLN2Q9Y4G6 2542 aa16.15■□□□□ 0.18
AC004540.1-201ENST00000439120 ATP6V1G2-DDX39BF2Z307 99 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 NPIPB7O75200 414 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 LGI1O95970 557 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 ARAFP10398 606 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 PNMTP11086 282 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 ZNF43P17038 809 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 PRKAR1BP31321 381 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 AQP5P55064 265 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 IL1RL1Q01638 556 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 KRTAP1-1Q07627 177 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 LRIF1Q5T3J3 769 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 HMBOX1Q6NT76 420 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 REEP3Q6NUK4 255 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 DNM1P46Q6ZS02 220 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 RNF217Q8TC41 542 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 EBF4Q9BQW3 602 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 CCDC28BQ9BUN5 200 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 HEATR1Q9H583 2144 aaKnown RBP16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 SLCO1B3Q9NPD5 702 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 SLC25A37Q9NYZ2 338 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 SLC13A4Q9UKG4 626 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 CORO2BQ9UQ03 480 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 MOKQ9UQ07 419 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 PMF1-BGLAPU3KQ54 211 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 CSPG4Q6UVK1 2322 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 CR1P17927 2039 aa16.14■□□□□ 0.17
AC004540.1-201ENST00000439120 EVPLLA8MZ36 301 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 OR2T1O43869 369 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 CRLF1O75462 422 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 HOXB9P17482 250 aaPredicted RBP16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 PAX7P23759 505 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 APOBEC3AP31941 199 aaPredicted RBP16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 P2RY4P51582 365 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 CDK6Q00534 326 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 LGALS3BPQ08380 585 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 C1DQ13901 141 aaKnown RBP16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 TBRG1Q3YBR2 411 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 C5orf46Q6UWT4 87 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 EPHX4Q8IUS5 362 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 FUNDC1Q8IVP5 155 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 OR1K1Q8NGR3 316 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 HTRA1Q92743 480 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 SLC38A4Q969I6 547 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 KTI12Q96EK9 354 aaPredicted RBP16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 ATP6V1G3Q96LB4 118 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 ZNF607Q96SK3 696 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 C12orf10Q9HB07 376 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 YAE1D1Q9NRH1 226 aa16.13■□□□□ 0.17
AC004540.1-201ENST00000439120 IGHV4-30-2A0A087WSY4 118 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 PRORSD1PA6NEY8 169 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 KIAA1324LA8MWY0 1029 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 FTCDNL1E5RQL4 147 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 H7C417 338 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 AIM2O14862 343 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 TLX2O43763 284 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 CD5LO43866 347 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 SLC43A1O75387 559 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 SLC6A2P23975 617 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 SH3BGRP55822 239 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 CLDN17P56750 224 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 AGKQ53H12 422 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 ALG10BQ5I7T1 473 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 KDM8Q8N371 416 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 DNAJA4Q8WW22 397 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 ZNF317Q96PQ6 595 aaPredicted RBP16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 SLC38A2Q96QD8 506 aa16.12■□□□□ 0.17
AC004540.1-201ENST00000439120 PTDSS2Q9BVG9 487 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms