RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 RPS4Y1P22090 263 aaKnown RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 EVX1P49640 407 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 CLDN12P56749 244 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RNLSQ5VYX0 342 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 XKRXQ6PP77 449 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RTL4Q6ZR62 310 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 PRSS45Q7RTY3 260 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 KANSL1Q7Z3B3 1105 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 TMPRSS9Q7Z410 1059 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 BCORP1Q8N888 145 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 GALNT6Q8NCL4 622 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ABHD4Q8TB40 342 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 DGAT2Q96PD7 388 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 CITED4Q96RK1 184 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 ADGRL4Q9HBW9 690 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 RPS6KB2Q9UBS0 482 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 AK6Q9Y3D8 172 aaKnown RBP8.67□□□□□ -1.02
CUX1-206ENST00000437600 FER1L5A0AVI2 2057 aa8.67□□□□□ -1.02
CUX1-206ENST00000437600 IGHV1OR21-1A0A087WYE8 117 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 OR6C68A6NDL8 312 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 CENPXA8MT69 81 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 C17orf105B2RV13 164 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 EIF4EP06730 217 aaKnown RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 SP9P0CG40 484 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 GIMD1P0DJR0 217 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 CD1CP29017 333 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 FGF9P31371 208 aaPredicted RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 NUDT1P36639 197 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 AQP2P41181 271 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 P2RX3P56373 397 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 GALK2Q01415 458 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 HYAL4Q2M3T9 481 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 ACSM3Q53FZ2 586 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 GARNL3Q5VVW2 1013 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 CD200R1LQ6Q8B3 271 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 TMPRSS11FQ6ZWK6 438 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 WDR5BQ86VZ2 330 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 TOR1AIP2Q8NFQ8 470 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 OR5H6Q8NGV6 325 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 BRIX1Q8TDN6 353 aaKnown RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 THAP3Q8WTV1 239 aaPredicted RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 HSD17B8Q92506 261 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 MOGAT1Q96PD6 335 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 ANKRD19PQ9H560 264 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 PPP1R3EQ9H7J1 279 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 ERVMER34-1Q9H9K5 563 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 BEX1Q9HBH7 125 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 PAQR5Q9NXK6 330 aaPredicted RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 MRPL15Q9P015 296 aaKnown RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 ATPIF1Q9UII2 106 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 GNG8Q9UK08 70 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 PILRBQ9UKJ0 227 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 FAM186AA6NE01 2351 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 IGHV3-20A0A0C4DH32 117 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 TLCD2A6NGC4 264 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 RAD1O60671 282 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 TSPAN9O75954 239 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 PTHLHP12272 177 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 SNRPBP14678 240 aaKnown RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 HPGDP15428 266 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 GALEQ14376 348 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 CDK10Q15131 360 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 SHBQ15464 509 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 TOMM34Q15785 309 aaPredicted RBP8.66□□□□□ -1.02
CUX1-206ENST00000437600 TRIQKQ629K1 86 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 LYPD8Q6UX82 237 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 SERPINA12Q8IW75 414 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 ELMOD2Q8IZ81 293 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 ENKURQ8TC29 256 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 ST6GAL2Q96JF0 529 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 Q96M85 177 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 STACQ99469 402 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 COQ7Q99807 217 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 FKRPQ9H9S5 495 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 COPS3Q9UNS2 423 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 PLCL2Q9UPR0 1127 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 TRAPPC4Q9Y296 219 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 SLC35A3Q9Y2D2 325 aa8.66□□□□□ -1.02
CUX1-206ENST00000437600 BOD1L1Q8NFC6 3051 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 TVP23AA6NH52 213 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 LILRA5A6NI73 299 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 DCTN6O00399 190 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 GDF9O60383 454 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 SRPX2O60687 465 aaPredicted RBP8.65□□□□□ -1.02
CUX1-206ENST00000437600 MYL9P24844 172 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 GABRA4P48169 554 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 INPP1P49441 399 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 EFNA3P52797 238 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 HLA-BQ31612 363 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 TRIM61Q5EBN2 209 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 RDH10Q8IZV5 341 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 LSMEM1Q8N8F7 131 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 OR14A2Q96R54 314 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 SNX18Q96RF0 628 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 ABHD1Q96SE0 405 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 NDC1Q9BTX1 674 aa8.65□□□□□ -1.02
CUX1-206ENST00000437600 NXF5Q9H1B4 397 aaKnown RBP8.65□□□□□ -1.02
CUX1-206ENST00000437600 RPRD1BQ9NQG5 326 aaKnown RBP8.65□□□□□ -1.02
CUX1-206ENST00000437600 ENAMQ9NRM1 1142 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms