RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 POLR2HP52434 150 aaKnown RBP23.36■■□□□ 1.33
CPNE1-216ENST00000437340 ZFP36L1Q07352 338 aaKnown RBP23.36■■□□□ 1.33
CPNE1-216ENST00000437340 SF3A2Q15428 464 aaKnown RBP23.36■■□□□ 1.33
CPNE1-216ENST00000437340 NANOGNBQ7Z5D8 188 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 AGBL5Q8NDL9 886 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 GPR119Q8TDV5 335 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 TAAR8Q969N4 342 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 SLC30A2Q9BRI3 323 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 TPK1Q9H3S4 243 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 WDR54Q9H977 334 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 NXT1Q9UKK6 140 aaKnown RBP23.36■■□□□ 1.33
CPNE1-216ENST00000437340 A0A1W2PQL4 384 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-216ENST00000437340 SLC35F4A4IF30 521 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 ADAM10O14672 748 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 HIST1H2ABP04908 130 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 SPI1P17947 270 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 SDHAP31040 664 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 MXD1Q05195 221 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 TRAM1Q15629 374 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 HIST3H2AQ7L7L0 130 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 GRINAQ7Z429 371 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 AP3S1Q92572 193 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 HIST1H2ACQ93077 130 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 ABTB1Q969K4 478 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-216ENST00000437340 RASD2Q96D21 266 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 TMCO6Q96DC7 493 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 ZMYND19Q96E35 227 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-216ENST00000437340 WDR70Q9NW82 654 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 TRBV11-1A0A0K0K1C0 115 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 OR6C68A6NDL8 312 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 PLPP2O43688 288 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 SLC25A12O75746 678 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 MT-ATP6P00846 226 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 SLC25A1P53007 311 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 CTXN1P60606 82 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 TCF15Q12870 199 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 HNRNPA0Q13151 305 aaKnown RBP23.35■■□□□ 1.33
CPNE1-216ENST00000437340 QPRTQ15274 297 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 VASH1Q7L8A9 365 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-216ENST00000437340 MARCH9Q86YJ5 346 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 SNX29P2Q8IUI4 249 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 BMPERQ8N8U9 685 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 PPP1R14BQ96C90 147 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 HDHD5Q9BXW7 423 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 KCNN2Q9H2S1 579 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 TAS2R10Q9NYW0 307 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 PCDHGB2Q9Y5G2 931 aa23.35■■□□□ 1.33
CPNE1-216ENST00000437340 TEX13CA0A0J9YWL9 993 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 BGLAPP02818 100 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 TNFSF8P32971 234 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 HTR3AP46098 478 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 ACTA2P62736 377 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 ACTG2P63267 376 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 RPL18Q07020 188 aaKnown RBP23.34■■□□□ 1.33
CPNE1-216ENST00000437340 DBPQ10586 325 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-216ENST00000437340 LCN10Q6JVE6 187 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 DBX2Q6ZNG2 339 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 JAZF1Q86VZ6 243 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 SYS1Q8N2H4 156 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 SYT14Q8NB59 555 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 PRSS33Q8NF86 280 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 DUSP19Q8WTR2 217 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 C4orf36Q96KX1 117 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 Q96M85 177 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 MESP1Q9BRJ9 268 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 PLEKHB1Q9UF11 243 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-216ENST00000437340 ZMIZ1Q9ULJ6 1067 aa23.34■■□□□ 1.33
CPNE1-216ENST00000437340 TMEM200CA6NKL6 621 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 RGS9O75916 674 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-216ENST00000437340 TFP02787 698 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 CLEC2LP0C7M8 214 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 RPS5P46782 204 aaKnown RBP23.33■■□□□ 1.33
CPNE1-216ENST00000437340 GPR139Q6DWJ6 353 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 LEG1Q6P5S2 330 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 C5orf46Q6UWT4 87 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 PLEKHG7Q6ZR37 379 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 TTC9Q92623 222 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 HGDQ93099 445 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 MRPL48Q96GC5 212 aaKnown RBP23.33■■□□□ 1.33
CPNE1-216ENST00000437340 CTRCQ99895 268 aa23.33■■□□□ 1.33
CPNE1-216ENST00000437340 SIRT4Q9Y6E7 314 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-216ENST00000437340 C17orf51A8MQB3 221 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 RGS5O15539 181 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 GMFGO60234 142 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 NPIPB7O75200 414 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 GLCEO94923 617 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 ZNF806P0C7X5 589 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 F8A1P23610 371 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 C17orf67Q0P5P2 114 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 TMEM91Q6ZNR0 172 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 LYSMD2Q8IV50 215 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 SLC35F2Q8IXU6 374 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 LSM14AQ8ND56 463 aaKnown RBP23.32■■□□□ 1.32
CPNE1-216ENST00000437340 NEIL3Q8TAT5 605 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 RNF138Q8WVD3 245 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 TMEM234Q8WY98 164 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 CCDC32Q9BV29 185 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 MOKQ9UQ07 419 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 TRAPPC4Q9Y296 219 aa23.32■■□□□ 1.32
CPNE1-216ENST00000437340 CMAHPQ9Y471 501 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms