RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 LIPT2A6NK58 231 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 AQP7P3A6NL99 342 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 ELOA3DA6NLF2 546 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 NDUFS8O00217 210 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 KLF11O14901 512 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 PHF1O43189 567 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 GPRIN2O60269 458 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 AKR7A3O95154 331 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 VAMP5O95183 116 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 GSNP06396 782 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 PGRP06401 933 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 CHRM4P08173 479 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 IDO1P14902 403 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 CREB1P16220 341 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 SRD5A1P18405 259 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 PAX7P23759 505 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 CRATP43155 626 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 CRISP3P54108 245 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 SH3BGRP55822 239 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 IL1RL1Q01638 556 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 EPS8Q12929 822 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 C1DQ13901 141 aaKnown RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 CEACAM7Q14002 265 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 SLC17A1Q14916 467 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 SYPL1Q16563 259 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 ELOA3BQ3SY89 546 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 IQCCQ4KMZ1 466 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 HIKESHIQ53FT3 197 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 C6orf10Q5SRN2 563 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 TSPO2Q5TGU0 170 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 WBP2NLQ6ICG8 309 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 C11orf71Q6IPW1 123 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 FAM166AQ6J272 317 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 OGFOD2Q6N063 350 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 SYT9Q86SS6 491 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 ANKRD42Q8N9B4 389 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 GLB1L3Q8NCI6 653 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 ZNF540Q8NDQ6 660 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 ELOA3Q8NG57 546 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 OR10H5Q8NGA6 315 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 OR52P1PQ8NH57 321 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 PROX1Q92786 737 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 TMEM45BQ96B21 275 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 C3orf49Q96BT1 292 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 ZG16BQ96DA0 208 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 AURKBQ96GD4 344 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 ALKBH3Q96Q83 286 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 VRK1Q99986 396 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 RMND5AQ9H871 391 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 CHODLQ9H9P2 273 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 MEAF6Q9HAF1 191 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 SSU72Q9NP77 194 aaKnown RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 MYOZ1Q9NP98 299 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 AIG1Q9NVV5 245 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 THUMPD1Q9NXG2 353 aaKnown RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 RPS6KB2Q9UBS0 482 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 FBXO9Q9UK97 447 aaPredicted RBP6.79□□□□□ -1.32
VPS50-203ENST00000436177 PRDM4Q9UKN5 801 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 FREM1Q5H8C1 2179 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 ALPK2Q86TB3 2170 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 HEATR5AQ86XA9 2040 aa6.79□□□□□ -1.32
VPS50-203ENST00000436177 CHD3Q12873 2000 aaKnown RBP6.78□□□□□ -1.32
VPS50-203ENST00000436177 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
VPS50-203ENST00000436177 LOC100289279A0A1B0GTE1 492 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 ZC3H12DA2A288 527 aaKnown RBP6.78□□□□□ -1.32
VPS50-203ENST00000436177 A8MVM7 634 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 C5orf58C9J3I9 102 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 SLCO1B7G3V0H7 640 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 HDAC3O15379 428 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 AKAP8O43823 692 aaKnown RBP6.78□□□□□ -1.32
VPS50-203ENST00000436177 LMX1BO60663 402 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 LGI1O95970 557 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 IL6P05231 212 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 BCHEP06276 602 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 GKN3PP0CG01 181 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 IMPDH2P12268 514 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 APEHP13798 732 aaKnown RBP6.78□□□□□ -1.32
VPS50-203ENST00000436177 SERPINF1P36955 418 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 FOXG1P55316 489 aaPredicted RBP6.78□□□□□ -1.32
VPS50-203ENST00000436177 DSTNP60981 165 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 NCALDP61601 193 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 UFM1P61960 85 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 H3F3AP84243 136 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 TBRG1Q3YBR2 411 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 CEP85LQ5SZL2 805 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 C1orf140Q5VVS0 124 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 ATG16L1Q676U5 607 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 WDR93Q6P2C0 686 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 NIPAL3Q6P499 406 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 VHLLQ6RSH7 139 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 TMEM99Q8N816 258 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 WDR31Q8NA23 367 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 C10orf105Q8TEF2 133 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 SLC25A36Q96CQ1 311 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 ITCHQ96J02 903 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 ZNF317Q96PQ6 595 aaPredicted RBP6.78□□□□□ -1.32
VPS50-203ENST00000436177 SLC38A2Q96QD8 506 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 SORT1Q99523 831 aa6.78□□□□□ -1.32
VPS50-203ENST00000436177 KATNB1Q9BVA0 655 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms