RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 FAM3CQ92520 227 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 COX14Q96I36 57 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ZFYVE21Q9BQ24 234 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 OR8D2Q9GZM6 311 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 FXYD6Q9H0Q3 95 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 FOLH1BQ9HBA9 442 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ACOXLQ9NUZ1 547 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 TAS2R10Q9NYW0 307 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 THAP10Q9P2Z0 257 aaPredicted RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 SLC35A3Q9Y2D2 325 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 HEBP2Q9Y5Z4 205 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 EPG5Q9HCE0 2579 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 CELSR3Q9NYQ7 3312 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 MED12Q93074 2177 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 SULT1B1O43704 296 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 HIST1H2ABP04908 130 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 UGT2B7P16662 529 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 CBX5P45973 191 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 OR3A3P47888 321 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 VEGFCP49767 419 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 PPP1CAP62136 330 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 GAS6Q14393 721 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 TMEM69Q5SWH9 247 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 PYHIN1Q6K0P9 492 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 WDR88Q6ZMY6 472 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 HIST3H2AQ7L7L0 130 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 VN1R4Q7Z5H5 301 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 TMED4Q7Z7H5 227 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 GPALPP1Q8IXQ4 340 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ZBTB44Q8NCP5 570 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 OR52N1Q8NH53 320 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 HIST1H2ACQ93077 130 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 MMABQ96EY8 250 aaPredicted RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 WDR92Q96MX6 357 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 CNN2Q99439 309 aaKnown RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 ELF4Q99607 663 aaPredicted RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 DHRS9Q9BPW9 319 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 HDAC8Q9BY41 377 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 SEMA4CQ9C0C4 833 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ADAM19Q9H013 955 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 MGAT4CQ9UBM8 478 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 ING1Q9UK53 422 aaPredicted RBP7.43□□□□□ -1.22
HPS4-205ENST00000429411 DAPP1Q9UN19 280 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 PIAS3Q9Y6X2 628 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 UNC13CQ8NB66 2214 aa7.43□□□□□ -1.22
HPS4-205ENST00000429411 CIB4A0PJX0 185 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ICMTO60725 284 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ALDOBP05062 364 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 PROS1P07225 676 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 HIST1H1CP16403 213 aaKnown RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 CTRB1P17538 263 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ATF4P18848 351 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 CXCL3P19876 107 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 IL32P24001 234 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 GSK3AP49840 483 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 UBE2MP61081 183 aaKnown RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 TDGQ13569 410 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 CTRB2Q6GPI1 263 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 SSX6Q7RTT6 188 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 CDRT4Q8N9R6 151 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ZFAND1Q8TCF1 268 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 DNAJA4Q8WW22 397 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 ACOT12Q8WYK0 555 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 SEC22CQ9BRL7 303 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 PLA2G2FQ9BZM2 168 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ULBP3Q9BZM4 244 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 NOX4Q9NPH5 578 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 SF3B6Q9Y3B4 125 aaKnown RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 TMEM72A0PK05 275 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 B9A039 149 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 SLC43A1O75387 559 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 RFPL3O75679 317 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 PIAS2O75928 621 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ZIC2O95409 532 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 C1QBP02746 253 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 UCHL1P09936 223 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 HTR2AP28223 471 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 PEBP1P30086 187 aaKnown RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 GDNFP39905 211 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 CLDN20P56880 219 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 PITPNAQ00169 270 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 KCNAB1Q14722 419 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ATXN7L3Q14CW9 347 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 LRRC37A5PQ49AS3 106 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 C19orf48Q6RUI8 117 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 NLRC3Q7RTR2 1065 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 RASGRP3Q8IV61 690 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 SLC35F2Q8IXU6 374 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 POGLUT1Q8NBL1 392 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 COQ8AQ8NI60 647 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 RIT1Q92963 219 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 PTP4A1Q93096 173 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 GON7Q9BXV9 100 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 TSPAN10Q9H1Z9 355 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 C8orf33Q9H7E9 229 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 PPP1R3EQ9H7J1 279 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ASB6Q9NWX5 421 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 ATXN7L1Q9ULK2 861 aaPredicted RBP7.42□□□□□ -1.22
HPS4-205ENST00000429411 POLHQ9Y253 713 aa7.42□□□□□ -1.22
HPS4-205ENST00000429411 COL4A4P53420 1690 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms