RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 HEXA-AS1Q9H8Q6 139 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 HRASLS2Q9NWW9 162 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 KIAA1671Q9BY89 1806 aa11.46□□□□□ -0.57
CDH3-202ENST00000429102 KCNAB3O43448 404 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 ZFPL1O95159 310 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 DBIP07108 87 aaKnown RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 EEF1A1P68104 462 aaKnown RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 PITPNAQ00169 270 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 TMEM44Q2T9K0 475 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 EIPR1Q53HC9 387 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 B3GNTL1Q67FW5 361 aaPredicted RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 OR56B4Q8NH76 319 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 SAV1Q9H4B6 383 aaPredicted RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 TRPV4Q9HBA0 871 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 ATXN7L1Q9ULK2 861 aaPredicted RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 COLEC10Q9Y6Z7 277 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 ANXA2P2A6NMY6 339 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 GOSR2O14653 212 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 TRIM3O75382 744 aaPredicted RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 ANXA2P07355 339 aaKnown RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 CFL1P23528 166 aaKnown RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 SLC6A6P31641 620 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 TRA2BP62995 288 aaKnown RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 MLC1Q15049 377 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 CD276Q5ZPR3 534 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 MAMSTRQ6ZN01 415 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 ZNF765Q7L2R6 523 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 MFSD9Q8NBP5 474 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 ZNF784Q8NCA9 323 aaPredicted RBP11.46□□□□□ -0.58
CDH3-202ENST00000429102 OR11G2Q8NGC1 345 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 OR51D1Q8NGF3 324 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 BADQ92934 168 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 EMC7Q9NPA0 242 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 NCDNQ9UBB6 729 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 PCDHGA5Q9Y5G8 931 aa11.46□□□□□ -0.58
CDH3-202ENST00000429102 PIN1P1O15428 100 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 KRT33AO76009 404 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 PRKACAP17612 351 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 CDK5R1Q15078 307 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 C2orf68Q2NKX9 166 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 ELP2Q6IA86 826 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 C3P1Q6ZMU1 363 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 OR4C3Q8NH37 302 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 ZNF707Q96C28 371 aaPredicted RBP11.45□□□□□ -0.58
CDH3-202ENST00000429102 S100A16Q96FQ6 103 aaKnown RBP11.45□□□□□ -0.58
CDH3-202ENST00000429102 GPR137Q96N19 417 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 GSX2Q9BZM3 304 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 BAIAP2Q9UQB8 552 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 SESN1Q9Y6P5 492 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 TRAV18A0A075B6X5 111 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 B8ZZF3 427 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 PYCARD-AS1I3L0S3 204 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 CDK2AP1O14519 115 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 CXCL2P19875 107 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 TUSC1Q2TAM9 212 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 ARHGAP11BQ3KRB8 267 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 SCGB2B2Q4G0G5 96 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 OR10K2Q6IF99 312 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 C17orf107Q6ZR85 190 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 BTN2A1Q7KYR7 527 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 SEC22AQ96IW7 307 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 C10orf90Q96M02 699 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 PLA2G2FQ9BZM2 168 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 MCCC2Q9HCC0 563 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 MED17Q9NVC6 651 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 PRR32B1ATL7 298 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 KLF4O43474 513 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 TBX19O60806 448 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 CSTAP01040 98 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 ACSM4P0C7M7 580 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 ZNF35P13682 527 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 RUNX3Q13761 415 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 GPR18Q14330 331 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 NKPD1Q17RQ9 610 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 CDONQ4KMG0 1287 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 DMKNQ6E0U4 476 aaPredicted RBP11.45□□□□□ -0.58
CDH3-202ENST00000429102 ZNF627Q7L945 461 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 DPY19L4Q7Z388 723 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 MRGPREQ86SM8 312 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 SLITRK4Q8IW52 837 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 DEFB119Q8N690 84 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 TSEN15Q8WW01 171 aaKnown RBP11.45□□□□□ -0.58
CDH3-202ENST00000429102 RBPMSQ93062 196 aaKnown RBP11.45□□□□□ -0.58
CDH3-202ENST00000429102 MOAP1Q96BY2 351 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 SORCS2Q96PQ0 1159 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 SCP2D1Q9UJQ7 156 aa11.45□□□□□ -0.58
CDH3-202ENST00000429102 ASXL3Q9C0F0 2248 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 ATP1B1P05026 303 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 ERGP11308 486 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 BTG2P78543 158 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 HDDC2Q7Z4H3 204 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 GLB1L2Q8IW92 636 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 KDM8Q8N371 416 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 BRIX1Q8TDN6 353 aaKnown RBP11.44□□□□□ -0.58
CDH3-202ENST00000429102 AHCYL2Q96HN2 611 aaKnown RBP11.44□□□□□ -0.58
CDH3-202ENST00000429102 CHST6Q9GZX3 395 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 TCEAL2Q9H3H9 227 aaPredicted RBP11.44□□□□□ -0.58
CDH3-202ENST00000429102 NTMQ9P121 344 aa11.44□□□□□ -0.58
CDH3-202ENST00000429102 ZNF223Q9UK11 482 aaPredicted RBP11.44□□□□□ -0.58
CDH3-202ENST00000429102 RABL2BQ9UNT1 228 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms