RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 SLC7A5P2Q9GIP4 190 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 SLC25A18Q9H1K4 315 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 BAIAP2Q9UQB8 552 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 MRPS17Q9Y2R5 130 aaKnown RBP10.55□□□□□ -0.72
UBR4-207ENST00000425413 AK6Q9Y3D8 172 aaKnown RBP10.55□□□□□ -0.72
UBR4-207ENST00000425413 CPED1A4D0V7 1026 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 B4DXG7 233 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 DCTN6O00399 190 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 BCAT2O15382 392 aaPredicted RBP10.55□□□□□ -0.72
UBR4-207ENST00000425413 PLPP2O43688 288 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 LANCL1O43813 399 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 CDC40O60508 579 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBR4-207ENST00000425413 DDAH2O95865 285 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
UBR4-207ENST00000425413 PPICP45877 212 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 MTNR1BP49286 362 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 ZNF117Q03924 483 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 EGR4Q05215 589 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 ASAH1Q13510 395 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBR4-207ENST00000425413 ALG10Q5BKT4 473 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 PRR23CQ6ZRP0 262 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 JAZF1Q86VZ6 243 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 OR4D9Q8NGE8 314 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 OR5H6Q8NGV6 325 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 ADAMTS18Q8TE60 1221 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 HSD17B8Q92506 261 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 LCORQ96JN0 433 aaPredicted RBP10.55□□□□□ -0.72
UBR4-207ENST00000425413 FYTTD1Q96QD9 318 aaKnown RBP10.55□□□□□ -0.72
UBR4-207ENST00000425413 GFM1Q96RP9 751 aaKnown RBP10.55□□□□□ -0.72
UBR4-207ENST00000425413 JAM3Q9BX67 310 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 ZNF304Q9HCX3 659 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 FGF21Q9NSA1 209 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 SERTAD3Q9UJW9 196 aa10.55□□□□□ -0.72
UBR4-207ENST00000425413 A0A1B0GTH9 108 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ACOD1A6NK06 481 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 PRR32B1ATL7 298 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 CENPAP49450 140 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 BCL2A1Q16548 175 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 DMKNQ6E0U4 476 aaPredicted RBP10.54□□□□□ -0.72
UBR4-207ENST00000425413 DPY19L2P2Q6ZN68 376 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 KRT74Q7RTS7 529 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 C9orf40Q8IXQ3 194 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 IZUMO1Q8IYV9 350 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ZNF433Q8N7K0 673 aaPredicted RBP10.54□□□□□ -0.72
UBR4-207ENST00000425413 FAM181AQ8N9Y4 354 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 C1orf216Q8TAB5 229 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 FAM174AQ8TBP5 190 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 TRMT10AQ8TBZ6 339 aaKnown RBP10.54□□□□□ -0.72
UBR4-207ENST00000425413 LPAR4Q99677 370 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 RANGRFQ9HD47 186 aaPredicted RBP10.54□□□□□ -0.72
UBR4-207ENST00000425413 NCDNQ9UBB6 729 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ST6GALNAC2Q9UJ37 374 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ICAM5Q9UMF0 924 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 A0A0B4J293 547 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 FAM240BA0A1B0GVZ2 78 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 DUX1O43812 170 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 PPM1BO75688 479 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 IL33O95760 270 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 OR8G3PP0DMU2 310 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 AHCYP23526 432 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 MAP2K3P46734 347 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 GBX2P52951 348 aaPredicted RBP10.54□□□□□ -0.72
UBR4-207ENST00000425413 ACTC1P68032 377 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ACTA1P68133 377 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 SIRPAP78324 504 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 BDH1Q02338 343 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 PLCXD2Q0VAA5 305 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 SMAD2Q15796 467 aaKnown RBP10.54□□□□□ -0.72
UBR4-207ENST00000425413 ZNF74Q16587 644 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ATG4DQ86TL0 474 aaPredicted RBP10.54□□□□□ -0.72
UBR4-207ENST00000425413 C17orf82Q86X59 251 aaPredicted RBP10.54□□□□□ -0.72
UBR4-207ENST00000425413 CMIPQ8IY22 773 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ZNF721Q8TF20 911 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 TAAR8Q969N4 342 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ST6GAL2Q96JF0 529 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ZFP3Q96NJ6 502 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 SLC46A1Q96NT5 459 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 ALG12Q9BV10 488 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 NRIP3Q9NQ35 241 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 INPP5EQ9NRR6 644 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 PLSCR3Q9NRY6 295 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 TMEM131Q92545 1883 aa10.54□□□□□ -0.72
UBR4-207ENST00000425413 TMEM72A0PK05 275 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 EEF1E1O43324 174 aaKnown RBP10.53□□□□□ -0.72
UBR4-207ENST00000425413 NDUFB5O43674 189 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 DIO1P49895 249 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 LGALS3BPQ08380 585 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 QPRTQ15274 297 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 HBMQ6B0K9 141 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 OGFOD3Q6PK18 319 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 PLET1Q6UQ28 207 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 NANOGNBQ7Z5D8 188 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 PLXDC1Q8IUK5 500 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 SDR16C5Q8N3Y7 309 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 CADM4Q8NFZ8 388 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 TBL1XR1Q9BZK7 514 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 VN1R1Q9GZP7 353 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 MMP25Q9NPA2 562 aa10.53□□□□□ -0.72
UBR4-207ENST00000425413 PAQR5Q9NXK6 330 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms