RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 NPIPA5A0A0B4J1W7 369 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 KANTRA0A1W2PQU2 76 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF840PA6NDX5 716 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 NPIPA7E9PJI5 369 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 H7BY64 318 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 UBE2CO00762 179 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 PIN1P1O15428 100 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 STX11O75558 287 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 ITGA10O75578 1167 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 MAS1P04201 325 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 HEXAP06865 529 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 NPIPA8P0DM63 369 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 SRMP19623 302 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 MAKP20794 623 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 AP1S1P61966 158 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 SKP2Q13309 424 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 EIF2S3LQ2VIR3 472 aaKnown RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 GXYLT1Q4G148 440 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 TEX30Q5JUR7 227 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 UBE2NLQ5JXB2 153 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 CLLU1OSQ5K130 101 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF761Q86XN6 746 aaPredicted RBP10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 OR13C2Q8NGS9 318 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 COL26A1Q96A83 441 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 CXorf40BQ96DE9 158 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 PRAP1Q96NZ9 151 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 CACNA1IQ9P0X4 2223 aa10.39□□□□□ -0.75
SEC61A1-202ENST00000424880 A0A1B0GVT2 93 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 ANKRD20A5PA0PJZ0 165 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 GABARAPH6UMI1 98 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 FOLR2P14207 255 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 EDNRAP25101 427 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 DDX6P26196 483 aaKnown RBP eCLIP10.38□□□□□ -0.756e-8■■■■□ 19.4
SEC61A1-202ENST00000424880 C21orf62-AS1Q17RA5 79 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 NDUFAF6Q330K2 333 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 EXOSC6Q5RKV6 272 aaKnown RBP10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 PLEKHS1Q5SXH7 462 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 COL13A1Q5TAT6 717 aaPredicted RBP10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 MOB3CQ70IA8 216 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 GDF7Q7Z4P5 450 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 SKA3Q8IX90 412 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 ARMC10Q8N2F6 343 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 OR56A3Q8NH54 315 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 CA5BP1Q8WTZ4 195 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 PFDN5Q99471 154 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 TCEAL7Q9BRU2 100 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 TEX12Q9BXU0 123 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF334Q9HCZ1 680 aaPredicted RBP10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 PPP1R14DQ9NXH3 145 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 ENTPD4Q9Y227 616 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 A0A1W2PQ45 241 aaPredicted RBP10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 A0A1W2PQY0 241 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 EIF4E2O60573 245 aaKnown RBP10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 CD3DP04234 171 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 SBK2P0C263 348 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 MPC1LP0DKB6 136 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 F3P13726 295 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF44P15621 663 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 PNLIPRP2P54317 469 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 TEAD2Q15562 447 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 MAPK14Q16539 360 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 WDR88Q6ZMY6 472 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 Q6ZVU0 165 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 RNF113BQ8IZP6 322 aaKnown RBP10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF565Q8N9K5 539 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 SDR9C7Q8NEX9 313 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 OR5P2Q8WZ92 322 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 GTF3AQ92664 365 aaKnown RBP10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 PELI1Q96FA3 418 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 CLCC1Q96S66 551 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 FAM117AQ9C073 453 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 CAPN10Q9HC96 672 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 ZFP57Q9NU63 452 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 FARSAQ9Y285 508 aaKnown RBP10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 NPFFR2Q9Y5X5 522 aa10.38□□□□□ -0.75
SEC61A1-202ENST00000424880 OR5H14A6NHG9 310 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 M0QYG6 137 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 SLCO2B1O94956 709 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 INHAP05111 366 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 GTF2F2P13984 249 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ST3GAL3Q11203 375 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ELAVL1Q15717 326 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 C10orf91Q5T1B1 145 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 JMJD6Q6NYC1 403 aaPredicted RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 GLB1LQ6UWU2 654 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNF836Q6ZNA1 936 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 BEND4Q6ZU67 534 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 RHOUQ7L0Q8 258 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 TMEM200AQ86VY9 491 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 NUDT13Q86X67 352 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ARL14EPQ8N8R7 260 aaPredicted RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 TMED6Q8WW62 240 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 ZNRF4Q8WWF5 429 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 DIO2Q92813 273 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 S100A16Q96FQ6 103 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 SLC41A3Q96GZ6 507 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 PARP12Q9H0J9 701 aaKnown RBP10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 POFUT1Q9H488 388 aa10.37□□□□□ -0.75
SEC61A1-202ENST00000424880 POLE3Q9NRF9 147 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms