RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 WNT16Q9UBV4 365 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 GNG8Q9UK08 70 aa13.17□□□□□ -0.3
MSH5-206ENST00000423982 MRPS17Q9Y2R5 130 aaKnown RBP13.17□□□□□ -0.3
MSH5-206ENST00000423982 TRBV2A0A0J9YWF9 115 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 SLC22A23A1A5C7 686 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 RIIAD1A6NNX1 92 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 CHURC1-FNTBB4DL54 471 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 ARPC5O15511 151 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
MSH5-206ENST00000423982 RPN2P04844 631 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 ZP3P21754 424 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 PEBP1P30086 187 aaKnown RBP13.16□□□□□ -0.3
MSH5-206ENST00000423982 ADH7P40394 386 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 PLAURQ03405 335 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 DYRK1AQ13627 763 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 GXYLT1Q4G148 440 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 TMEM35AQ53FP2 167 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 TSSK4Q6SA08 328 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 RD3Q7Z3Z2 195 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 FAM98AQ8NCA5 519 aaKnown RBP13.16□□□□□ -0.3
MSH5-206ENST00000423982 TOR1AIP2Q8NFQ8 470 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 OR4C6Q8NH72 309 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 IL21RQ9HBE5 538 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 ADAP2Q9NPF8 381 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 NTMQ9P121 344 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 SLC35A3Q9Y2D2 325 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 ALPK2Q86TB3 2170 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 GSTZ1O43708 216 aaPredicted RBP13.16□□□□□ -0.3
MSH5-206ENST00000423982 SERPINI2O75830 405 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 ATP1B1P05026 303 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 UCHL1P09936 223 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 RAB28P51157 221 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 PSMA6P60900 246 aaKnown RBP13.16□□□□□ -0.3
MSH5-206ENST00000423982 CDK5R1Q15078 307 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 TRAM1Q15629 374 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 RGS7BPQ6MZT1 257 aaPredicted RBP13.16□□□□□ -0.3
MSH5-206ENST00000423982 SYT13Q7L8C5 426 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 OR52E2Q8NGJ4 325 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 MOAP1Q96BY2 351 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 RADILQ96JH8 1075 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 PTCHD1Q96NR3 888 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 LIN7BQ9HAP6 207 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 NANSQ9NR45 359 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 SLCO1B1Q9Y6L6 691 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 CACNA1CQ13936 2221 aa13.16□□□□□ -0.3
MSH5-206ENST00000423982 TRAV1-2A0A0B4J238 106 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 ADAM11O75078 769 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 SEMA4FO95754 770 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 TGM6O95932 706 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 TMIGD3P0DMS9 266 aaPredicted RBP13.15□□□□□ -0.3
MSH5-206ENST00000423982 IGFALSP35858 605 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 TAS2R43P59537 309 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 PLA2G7Q13093 441 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 KRT33BQ14525 404 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 UBE2NLQ5JXB2 153 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 FAM122CQ6P4D5 195 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 ZC3H14Q6PJT7 736 aaKnown RBP13.15□□□□□ -0.3
MSH5-206ENST00000423982 ZAR1Q86SH2 424 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 RANBP3LQ86VV4 465 aaPredicted RBP13.15□□□□□ -0.3
MSH5-206ENST00000423982 MEIOBQ8N635 442 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 OR52H1Q8NGJ2 320 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 OR52E1Q8NGJ3 308 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 ZCCHC10Q8TBK6 192 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 SMIM19Q96E16 107 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 SHDQ96IW2 340 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
MSH5-206ENST00000423982 COPS3Q9UNS2 423 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 ZNF860A6NHJ4 632 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 MCRIP1C9JLW8 97 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 SUSD5O60279 629 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 NGFRP08138 427 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 CD53P19397 219 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 NFYAP23511 347 aaPredicted RBP13.15□□□□□ -0.3
MSH5-206ENST00000423982 EDNRAP25101 427 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 HSD17B2P37059 387 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 STARD6P59095 220 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 HSD17B12Q53GQ0 312 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 ATRAIDQ6UW56 229 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 ZNF614Q8N883 585 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 OR5M1Q8NGP8 315 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 C10orf90Q96M02 699 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 SHARPINQ9H0F6 387 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 KIF25Q9UIL4 384 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 FBXL2Q9UKC9 423 aa13.15□□□□□ -0.3
MSH5-206ENST00000423982 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 FAM171A2A8MVW0 826 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 BET1O15155 118 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 FMO6PO60774 539 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 RCBTB2O95199 551 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 ZNF888P0CJ79 500 aaPredicted RBP13.14□□□□□ -0.31
MSH5-206ENST00000423982 SIRPAP78324 504 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 HLXQ14774 488 aaPredicted RBP13.14□□□□□ -0.31
MSH5-206ENST00000423982 METTL11BQ5VVY1 283 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 GLDNQ6ZMI3 551 aaPredicted RBP13.14□□□□□ -0.31
MSH5-206ENST00000423982 TEX19Q8NA77 164 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 OR2L3Q8NG85 312 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 MS4A4EQ96PG1 132 aa13.14□□□□□ -0.31
MSH5-206ENST00000423982 C7orf50Q9BRJ6 194 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms