RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PGGHGQ32M88 737 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 KCTD21Q4G0X4 260 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 EMC4Q5J8M3 183 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 RBM48Q5RL73 367 aaKnown RBP12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 MEDAGQ5VYS4 303 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 ACSM5Q6NUN0 579 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 TMPPEQ6ZT21 453 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 ENTHD1Q8IYW4 607 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 FAM109AQ8N4B1 249 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 OR5J2Q8NH18 312 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 JSRP1Q96MG2 331 aaPredicted RBP12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 SLC38A2Q96QD8 506 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 ZNF696Q9H7X3 374 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 PLCXD1Q9NUJ7 323 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 ALKBH4Q9NXW9 302 aa12.84□□□□□ -0.35
SHMT1P1-201ENST00000419974 PIEZO2Q9H5I5 2752 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 A0A1W2PNV4 684 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 G3V3Y1 287 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 ACOT7O00154 380 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 SURF4O15260 269 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 SEC14L5O43304 696 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 EIF1BO60739 113 aaKnown RBP12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 MRPS14O60783 128 aaKnown RBP12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 TNFAIP8O95379 198 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 IGHG3P01860 377 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 IGHMP01871 453 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 HIST1H2ABP04908 130 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 SFTPCP11686 197 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 IMPDH2P12268 514 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 GDF1P27539 372 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 POU1F1P28069 291 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 AGFG1P52594 562 aaKnown RBP12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 MYBPHQ13203 477 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 TBR1Q16650 682 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 C6orf141Q5SZD1 244 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 LAIR2Q6ISS4 152 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 CASP12Q6UXS9 341 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 ESPNLQ6ZVH7 1005 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 H1FNTQ75WM6 255 aaPredicted RBP12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 HIST3H2AQ7L7L0 130 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 P3H2Q8IVL5 708 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 TMEM251Q8N6I4 163 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 LRRC17Q8N6Y2 441 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 HIST1H2ACQ93077 130 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 ARL5BQ96KC2 179 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 SAMD8Q96LT4 415 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 Q96MT0 163 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 ASPNQ9BXN1 380 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 HES7Q9BYE0 225 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 ADNPQ9H2P0 1102 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 CMC2Q9NRP2 79 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 TBC1D23Q9NUY8 699 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 ZNF226Q9NYT6 803 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 TAS2R5Q9NYW4 299 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 RNF6Q9Y252 685 aa12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 HELZ2Q9BYK8 2649 aaKnown RBP12.83□□□□□ -0.36
SHMT1P1-201ENST00000419974 TRAV27A0A087WT01 109 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 MAGEA13PA6NCF6 341 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 M0R3G1 203 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 PLPP3O14495 311 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 WBP4O75554 376 aaKnown RBP12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 ACTL6AO96019 429 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 F10P00742 488 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 CD14P08571 375 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 IGFBP1P08833 259 aaPredicted RBP12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 IL11P20809 199 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 CSNK2A1P68400 391 aaPredicted RBP12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 SLC35A1P78382 337 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 MYBPC1Q00872 1141 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 CTU2Q2VPK5 515 aaKnown RBP12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 LINC00303Q3SY05 128 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 ZNF362Q5T0B9 420 aaPredicted RBP12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 RAET1LQ5VY80 246 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 GPR139Q6DWJ6 353 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 PAQR6Q6TCH4 344 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 Q6ZPB1 254 aaPredicted RBP12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 FAM122BQ7Z309 247 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 OR4Q3Q8NH05 313 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 OR51A7Q8NH64 312 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 OR14L1PQ8NHC6 308 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 FAM81AQ8TBF8 368 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 APH1BQ8WW43 257 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 ADGRG7Q96K78 797 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 SNX18Q96RF0 628 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 TAPBPLQ9BX59 468 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 OR11A1Q9GZK7 315 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 KLHL1Q9NR64 748 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 IMPAD1Q9NX62 359 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 PAQR5Q9NXK6 330 aaPredicted RBP12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 MYRFQ9Y2G1 1151 aa12.82□□□□□ -0.36
SHMT1P1-201ENST00000419974 GCN1Q92616 2671 aaKnown RBP12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 A0A1B0GVC2 190 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 LRRN3E7EW58 273 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 VAMP5O95183 116 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 LYNP07948 512 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 P2RY4P51582 365 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 RAC3P60763 192 aa12.81□□□□□ -0.36
SHMT1P1-201ENST00000419974 PPIAP62937 165 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms