RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 DIO1P49895 249 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 GP2P55259 537 aaKnown RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 RPS3AP61247 264 aaKnown RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 RPL27P61353 136 aaKnown RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 FAM198BQ6UWH4 519 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 LSM14AQ8ND56 463 aaKnown RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 OR4Q3Q8NH05 313 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 ELP5Q8TE02 316 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 CT55Q8WUE5 264 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 JSRP1Q96MG2 331 aaPredicted RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 CLDN16Q9Y5I7 305 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 B3GALT1Q9Y5Z6 326 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 GON4LQ3T8J9 2241 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 ACOT7O00154 380 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 ZNF182P17025 639 aaPredicted RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 ITGA3P26006 1051 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 RPS5P46782 204 aaKnown RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 MLLT10P55197 1068 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 LSM3P62310 102 aaKnown RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 ERVK-25P63136 954 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 ZNF45Q02386 682 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 GLO1Q04760 184 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 ACSM1Q08AH1 577 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 AIMP2Q13155 320 aaKnown RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 GALEQ14376 348 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 CCDC58Q4VC31 144 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 FNDC7Q5VTL7 733 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 TMEM225Q6GV28 225 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 IL20RBQ6UXL0 311 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 WDR88Q6ZMY6 472 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 BMPERQ8N8U9 685 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 ADPRHL1Q8NDY3 354 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 UBE2FQ969M7 185 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 TEAD3Q99594 435 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 MRI1Q9BV20 369 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 PLA2G12AQ9BZM1 189 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 CHST11Q9NPF2 352 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 HINT3Q9NQE9 182 aaKnown RBP7.64□□□□□ -1.19
USP54-203ENST00000418501 POLHQ9Y253 713 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 RASD1Q9Y272 281 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 TMEM131Q92545 1883 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 GMFGO60234 142 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 TNFSF15O95150 251 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 IL1AP01583 271 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 CLPSP04118 112 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 CD59P13987 128 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 ZNF12P17014 697 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 CD226Q15762 336 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 HES3Q5TGS1 186 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 SLC18B1Q6NT16 456 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 ZNF321PQ8N8H1 164 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 OR2AJ1Q8NGZ0 328 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 C8orf44Q96CB5 159 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 RASL10BQ96S79 203 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 TXNIPQ9H3M7 391 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 NRIP3Q9NQ35 241 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 KLHL1Q9NR64 748 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 SLC22A11Q9NSA0 550 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 KCNG2Q9UJ96 466 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 IKZF2Q9UKS7 526 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 CHST2Q9Y4C5 530 aa7.64□□□□□ -1.19
USP54-203ENST00000418501 TAF4O00268 1085 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 RGS5O15539 181 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 DNPH1O43598 174 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 PTHP01270 115 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 HTR1AP08908 422 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 CPEP16870 476 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 DPP4P27487 766 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 AQP2P41181 271 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 TPBGQ13641 420 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 CRMP1Q14194 572 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 PCOLCEQ15113 449 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 RAET1LQ5VY80 246 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 TCEAL6Q6IPX3 200 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 RPL22L1Q6P5R6 122 aaKnown RBP7.63□□□□□ -1.19
USP54-203ENST00000418501 SLC16A9Q7RTY1 509 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 ARIH2OSQ8N7S6 290 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 APCDD1LQ8NCL9 501 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 TCEAL3Q969E4 200 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 ALG12Q9BV10 488 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 SMOC1Q9H4F8 434 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 RERGLQ9H628 205 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 SP140LQ9H930 580 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 TMEM165Q9HC07 324 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 ERVK13-1Q9NX77 482 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 SCN3AQ9NY46 2000 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 IGLV3-32A0A0A0MS00 114 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 ARHGEF9O43307 516 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 TXNDC12O95881 172 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 APOC1P02654 83 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 SBK2P0C263 348 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 ZNF17P17021 662 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 GADD45AP24522 165 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 GRPRP30550 384 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 MLF1P58340 268 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 CLRN1P58418 232 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 PUDPQ08623 228 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 SF3A2Q15428 464 aaKnown RBP7.63□□□□□ -1.19
USP54-203ENST00000418501 TAF13Q15543 124 aa7.63□□□□□ -1.19
USP54-203ENST00000418501 DDI2Q5TDH0 399 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms