RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SKP2Q13309 424 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 P2RY6Q15077 328 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 TOMM34Q15785 309 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 NDUFAF6Q330K2 333 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 HEPHL1Q6MZM0 1159 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 PLEKHM3Q6ZWE6 761 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 SSX8Q7RTT4 187 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 PIWIL3Q7Z3Z3 882 aaKnown RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 CXorf67Q86X51 503 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 WFDC8Q8IUA0 241 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 SVOPLQ8N434 492 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 ZHX1-C8orf76Q96EF9 292 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 C18orf12Q96KH6 178 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 SRXN1Q9BYN0 137 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 DLL4Q9NR61 685 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 LIPT1Q9Y234 373 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 ARID1AO14497 2285 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.2■□□□□ 0.5
PTPRU-203ENST00000415600 TMEM229AB2RXF0 380 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 EI24O14681 340 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 KIAA0513O60268 411 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 FCMRO60667 390 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 UGT2B17O75795 530 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 IFNA14P01570 189 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 FABP3P05413 133 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 AQP1P29972 269 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 MERTKQ12866 999 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 GNA13Q14344 377 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 Q5PR19 223 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 C6orf52Q5T4I8 152 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 TNFAIP8L2Q6P589 184 aaPredicted RBP18.2■□□□□ 0.5
PTPRU-203ENST00000415600 PRSS57Q6UWY2 283 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 VTCN1Q7Z7D3 282 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 PATL1Q86TB9 770 aaKnown RBP18.2■□□□□ 0.5
PTPRU-203ENST00000415600 TUSC5Q8IXB3 177 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 ZNF619Q8N2I2 560 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 ZNF563Q8TA94 476 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 OR5B2Q96R09 309 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 KLHDC3Q9BQ90 382 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 SERHL2Q9H4I8 314 aa18.2■□□□□ 0.5
PTPRU-203ENST00000415600 MAGEA13PA6NCF6 341 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 HMGN4O00479 90 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 DLGAP1O14490 977 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 GNGT2O14610 69 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 EFNA2O43921 213 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 TFPTP0C1Z6 253 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 APOBEC1P41238 236 aaKnown RBP18.19■□□□□ 0.5
PTPRU-203ENST00000415600 KCNJ10P78508 379 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 PDK3Q15120 406 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 GPAT3Q53EU6 434 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 REEP3Q6NUK4 255 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 TFAP2EQ6VUC0 442 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 HSD17B8Q92506 261 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 KISS1RQ969F8 398 aaPredicted RBP18.19■□□□□ 0.5
PTPRU-203ENST00000415600 TAMM41Q96BW9 452 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 TPD52L3Q96J77 140 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 CXorf56Q9H5V9 222 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 BCO1Q9HAY6 547 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.19■□□□□ 0.5
PTPRU-203ENST00000415600 ACER3Q9NUN7 267 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 EMC3Q9P0I2 261 aa18.19■□□□□ 0.5
PTPRU-203ENST00000415600 NF1P21359 2839 aa18.18■□□□□ 0.5
PTPRU-203ENST00000415600 RASGEF1BQ0VAM2 473 aa18.18■□□□□ 0.5
PTPRU-203ENST00000415600 KRTAP21-3Q3LHN1 58 aa18.18■□□□□ 0.5
PTPRU-203ENST00000415600 ZNF704Q6ZNC4 412 aaPredicted RBP18.18■□□□□ 0.5
PTPRU-203ENST00000415600 ZDHHC13Q8IUH4 622 aa18.18■□□□□ 0.5
PTPRU-203ENST00000415600 OR5K1Q8NHB7 308 aa18.18■□□□□ 0.5
PTPRU-203ENST00000415600 SLC38A5Q8WUX1 472 aa18.18■□□□□ 0.5
PTPRU-203ENST00000415600 LZICQ8WZA0 190 aa18.18■□□□□ 0.5
PTPRU-203ENST00000415600 HS3ST6Q96QI5 342 aa18.18■□□□□ 0.5
PTPRU-203ENST00000415600 ESRP2Q9H6T0 727 aaKnown RBP18.18■□□□□ 0.5
PTPRU-203ENST00000415600 C5orf58C9J3I9 102 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 G3V2T6 193 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 M0QX08 132 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 SULT2B1O00204 365 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 HPRP00739 348 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 BCHEP06276 602 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 THBDP07204 575 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 INHBBP09529 407 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 NID1P14543 1247 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 HTR3AP46098 478 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 ALDH3A2P51648 485 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 VLDLRP98155 873 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 BLMHQ13867 455 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 DAG1Q14118 895 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 SFRP5Q5T4F7 317 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 OR2T5Q6IEZ7 315 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 TYW3Q6IPR3 259 aaKnown RBP18.17■□□□□ 0.5
PTPRU-203ENST00000415600 TBPL2Q6SJ96 375 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 CMIPQ8IY22 773 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 GABRG1Q8N1C3 465 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 OR2T29Q8NH02 315 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 TMEM171Q8WVE6 324 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 RAB8BQ92930 207 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 S100PBPQ96BU1 408 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 PLPPR2Q96GM1 343 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 C7orf34Q96L11 122 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 SAP130Q9H0E3 1048 aa18.17■□□□□ 0.5
PTPRU-203ENST00000415600 EXOSC3Q9NQT5 275 aaKnown RBP18.17■□□□□ 0.5
PTPRU-203ENST00000415600 SMPD3Q9NY59 655 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms