RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SLC25A36Q96CQ1 311 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 HRASLS5Q96KN8 279 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 PITX2Q99697 317 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 TIMP4Q99727 224 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 ADI1Q9BV57 179 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 ASPNQ9BXN1 380 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 OR52D1Q9H346 318 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 RIBC2Q9H4K1 309 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 EGLN3Q9H6Z9 239 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 SLC25A19Q9HC21 320 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 TAS2R5Q9NYW4 299 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 SPRR3Q9UBC9 169 aa12.79□□□□□ -0.36
SF3B1-204ENST00000414963 NDRG4Q9ULP0 352 aaKnown RBP12.79□□□□□ -0.36
SF3B1-204ENST00000414963 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 LOC100130705A0A1B0GUX0 176 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 NPIPA5E9PKD4 350 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 M0R082 166 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 NDUFB2O95178 105 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 SOX14O95416 240 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 IGFBP1P08833 259 aaPredicted RBP12.78□□□□□ -0.36
SF3B1-204ENST00000414963 CAPGP40121 348 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 P2RY4P51582 365 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 RPS6KA3P51812 740 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 CARD18P57730 90 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 OR2B6P58173 313 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 PMS2P3Q13401 168 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 KEAP1Q14145 624 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 PTGES3Q15185 160 aaKnown RBP12.78□□□□□ -0.36
SF3B1-204ENST00000414963 WLSQ5T9L3 541 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 HBMQ6B0K9 141 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 PAQR6Q6TCH4 344 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 PCSK4Q6UW60 755 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 FAM180AQ6UWF9 173 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 NANOGNBQ7Z5D8 188 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 MEIOBQ8N635 442 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 LRRC75AQ8NAA5 344 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 ZNF555Q8NEP9 628 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 OR8D4Q8NGM9 314 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 ZNF417Q8TAU3 575 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 TEX47Q8TBZ9 253 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 FANK1Q8TC84 345 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 SMPDL3BQ92485 455 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 SAMD8Q96LT4 415 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 GPR137Q96N19 417 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 GPX7Q96SL4 187 aaPredicted RBP12.78□□□□□ -0.36
SF3B1-204ENST00000414963 ZNF587Q96SQ5 575 aaPredicted RBP12.78□□□□□ -0.36
SF3B1-204ENST00000414963 PLA2G12AQ9BZM1 189 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 ENKD1Q9H0I2 346 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 TIGARQ9NQ88 270 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
SF3B1-204ENST00000414963 NPIPA1Q9UND3 350 aa12.78□□□□□ -0.36
SF3B1-204ENST00000414963 ATMQ13315 3056 aa12.77□□□□□ -0.36
SF3B1-204ENST00000414963 MAP1BP46821 2468 aaKnown RBP12.77□□□□□ -0.37
SF3B1-204ENST00000414963 OR14I1A6ND48 311 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 AQP7P3A6NL99 342 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 H0YC42 278 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 H3BN98 237 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 EIF1AYO14602 144 aaKnown RBP12.77□□□□□ -0.37
SF3B1-204ENST00000414963 TNFSF11O14788 317 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 DENRO43583 198 aaKnown RBP12.77□□□□□ -0.37
SF3B1-204ENST00000414963 WISP2O76076 250 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.37
SF3B1-204ENST00000414963 GTF2E2P29084 291 aaKnown RBP12.77□□□□□ -0.37
SF3B1-204ENST00000414963 SLC6A6P31641 620 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 TPD52P55327 224 aaPredicted RBP12.77□□□□□ -0.37
SF3B1-204ENST00000414963 IL18R1Q13478 541 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 GINS1Q14691 196 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 C6orf52Q5T4I8 152 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 SLX4IPQ5VYV7 408 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 SLC27A4Q6P1M0 643 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 ARHGAP11AQ6P4F7 1023 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 THSD4Q6ZMP0 1018 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 DPY19L2P2Q6ZN68 376 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 USP51Q70EK9 711 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 OR52L1Q8NGH7 329 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 OR10D3Q8NH80 312 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 MOSPD2Q8NHP6 518 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 FAR1Q8WVX9 515 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 CYGBQ8WWM9 190 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 WDYHV1Q96HA8 205 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 NAA11Q9BSU3 229 aaPredicted RBP12.77□□□□□ -0.37
SF3B1-204ENST00000414963 NDEL1Q9GZM8 345 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 PRDM14Q9GZV8 571 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 EXO5Q9H790 373 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 BAIAP2Q9UQB8 552 aa12.77□□□□□ -0.37
SF3B1-204ENST00000414963 USP24Q9UPU5 2620 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 A0A1W2PNV4 684 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 NPIPB13A6NJU9 1138 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 NPIPB4C9JG80 1138 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 MS4A18H0YCH9 400 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 BLOC1S5-TXNDC5H3BN57 136 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 BHLHE40O14503 412 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 ARPC3O15145 178 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 SEC14L5O43304 696 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 IDH3BO43837 385 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 AKR7A3O95154 331 aa12.76□□□□□ -0.37
SF3B1-204ENST00000414963 VAMP5O95183 116 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms