RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 NIPSNAP1Q9BPW8 284 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 CNIH4Q9P003 139 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 CCDC59Q9P031 241 aaKnown RBP14.08□□□□□ -0.16
SHMT2-202ENST00000414700 ABI3Q9P2A4 366 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 VDAC3Q9Y277 283 aa14.08□□□□□ -0.16
SHMT2-202ENST00000414700 TPRP12270 2363 aaKnown RBP14.07□□□□□ -0.16
SHMT2-202ENST00000414700 PINLYPA6NC86 204 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 SHISA8B8ZZ34 492 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 RRP8O43159 456 aaKnown RBP14.07□□□□□ -0.16
SHMT2-202ENST00000414700 CHP2O43745 196 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 OR10H3O60404 316 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 MITFO75030 526 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-202ENST00000414700 SLC25A12O75746 678 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 GASTP01350 101 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 P04436 131 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 FOXK1P85037 733 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 MFAP5Q13361 173 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 WBP2NLQ6ICG8 309 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 ULK3Q6PHR2 472 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 POMZP3Q6PJE2 187 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 OR2M3Q8NG83 312 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 KLHL1Q9NR64 748 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 RPS6KB2Q9UBS0 482 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 TMCC3Q9ULS5 477 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 NBEAQ8NFP9 2946 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 MAP1BP46821 2468 aaKnown RBP14.07□□□□□ -0.16
SHMT2-202ENST00000414700 IGLV3-32A0A0A0MS00 114 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 OR5H15A6NDH6 313 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 CEACAM4O75871 244 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 CCNB2O95067 398 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 PGCP20142 388 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 TACR3P29371 465 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 IFNA8P32881 189 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 CASRP41180 1078 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 SLC1A3P43003 542 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 SLC6A8P48029 635 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 UGT2B15P54855 530 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 SMIM11AP58511 58 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 RPP38P78345 283 aaKnown RBP14.07□□□□□ -0.16
SHMT2-202ENST00000414700 KEAP1Q14145 624 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 CEP78Q5JTW2 689 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 GALNT5Q7Z7M9 940 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 GPALPP1Q8IXQ4 340 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 ATG16L2Q8NAA4 619 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 AQP11Q8NBQ7 271 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 PFN4Q8NHR9 129 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 RELTQ969Z4 430 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 ST6GAL2Q96JF0 529 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 GPA33Q99795 319 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 POLR2J2Q9GZM3 115 aaKnown RBP14.07□□□□□ -0.16
SHMT2-202ENST00000414700 GABARAPL1Q9H0R8 117 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 POLR2J3Q9H1A7 115 aaKnown RBP14.07□□□□□ -0.16
SHMT2-202ENST00000414700 SDHAF3Q9NRP4 125 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 PCDHGB6Q9Y5F9 930 aa14.07□□□□□ -0.16
SHMT2-202ENST00000414700 ANKUB1A6NFN9 424 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 FAAHO00519 579 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 AIREO43918 545 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 FAM20BO75063 409 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 KDM4DQ6B0I6 523 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 PGBD2Q6P3X8 592 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 FAHD1Q6P587 224 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 LINC00114Q6XXX2 140 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 ZNF730Q6ZMV8 503 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 ZER1Q7Z7L7 766 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 ATG4DQ86TL0 474 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-202ENST00000414700 PLCZ1Q86YW0 608 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 NRMQ8IXM6 262 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 FADS6Q8N9I5 356 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 ZNF540Q8NDQ6 660 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 MDS2Q8NDY4 140 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 ACOT11Q8WXI4 607 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-202ENST00000414700 NR4A3Q92570 626 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 FCGR1BQ92637 280 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 GTPBP3Q969Y2 492 aaKnown RBP14.06□□□□□ -0.16
SHMT2-202ENST00000414700 ZNF426Q9BUY5 554 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 ADAM19Q9H013 955 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 MEPEQ9NQ76 525 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-202ENST00000414700 C20orf141Q9NUB4 165 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 TAS2R10Q9NYW0 307 aa14.06□□□□□ -0.16
SHMT2-202ENST00000414700 PNMA8CA0A1B0GUJ8 204 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 LOC110117498-PIK3R3F6TDL0 507 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 K7ENP7 123 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 TRIM3O75382 744 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-202ENST00000414700 TRAPPC2P0DI81 140 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 TRAPPC2BP0DI82 140 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 CBLP22681 906 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 IGFBP5P24593 272 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 RFC3P40938 356 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 ETV6P41212 452 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 ARG2P78540 354 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 IL1RL1Q01638 556 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 TIGD3Q6B0B8 471 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 INO80CQ6PI98 192 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-202ENST00000414700 UTS2BQ765I0 119 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 PRICKLE2Q7Z3G6 844 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 KBTBD8Q8NFY9 601 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 OR5M1Q8NGP8 315 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 DNAJA4Q8WW22 397 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-202ENST00000414700 TMEM239Q8WW34 195 aa14.05□□□□□ -0.16
SHMT2-202ENST00000414700 IPCEF1Q8WWN9 437 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms