RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 MT-ND3P03897 115 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 IGKV4-1P06312 121 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 NPR2P20594 1047 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 IL10P22301 178 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 GDI1P31150 447 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 RABIFP47224 123 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 RPS14P62263 151 aaKnown RBP2.56□□□□□ -2
ATG4C-204ENST00000414558 HMGCS1Q01581 520 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 SF3A2Q15428 464 aaKnown RBP2.56□□□□□ -2
ATG4C-204ENST00000414558 MICBQ29980 383 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 MARCH8Q5T0T0 291 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 NEGR1Q7Z3B1 354 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 STXBP6Q8NFX7 210 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 ECSITQ9BQ95 431 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 IL26Q9NPH9 171 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 GGA2Q9UJY4 613 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 IGSF9BQ9UPX0 1349 aa2.56□□□□□ -2
ATG4C-204ENST00000414558 C12orf71A8MTZ7 269 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 RNASE2P10153 161 aaKnown RBP2.55□□□□□ -2
ATG4C-204ENST00000414558 PGAM1P18669 254 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 TDO2P48775 406 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 NUCB2P80303 420 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 SPIBQ01892 262 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 ASPHQ12797 758 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 PRSS8Q16651 343 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 PRR9Q5T870 116 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 PLBD1Q6P4A8 553 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 ZNF880Q6PDB4 577 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 MOB3BQ86TA1 216 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 PGAM4Q8N0Y7 254 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 OR1N2Q8NGR9 330 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 TM4SF19Q96DZ7 209 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 ITCHQ96J02 903 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 RANBP3Q9H6Z4 567 aaPredicted RBP2.55□□□□□ -2
ATG4C-204ENST00000414558 NINJ2Q9NZG7 142 aa2.55□□□□□ -2
ATG4C-204ENST00000414558 RPL36Q9Y3U8 105 aaKnown RBP2.55□□□□□ -2
ATG4C-204ENST00000414558 PTBP3O95758 552 aaKnown RBP2.54□□□□□ -2
ATG4C-204ENST00000414558 ACADVLP49748 655 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 PKNOX1P55347 436 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 GMFBP60983 142 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 PDZK1IP1Q13113 114 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 SLC25A52Q3SY17 297 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 RAB12Q6IQ22 244 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 LYPD2Q6UXB3 125 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 CALHM3Q86XJ0 350 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 KRTAP13-1Q8IUC0 172 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 MMAAQ8IVH4 418 aaKnown RBP2.54□□□□□ -2
ATG4C-204ENST00000414558 UBALD2Q8IYN6 164 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 CATSPER1Q8NEC5 780 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 SYNPRQ8TBG9 265 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 CD300LFQ8TDQ1 290 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 CMTM7Q96FZ5 175 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 SH3YL1Q96HL8 342 aaPredicted RBP2.54□□□□□ -2
ATG4C-204ENST00000414558 TMEM237Q96Q45 408 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 ULBP2Q9BZM5 246 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 HSD3B7Q9H2F3 369 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 ZFP14Q9HCL3 533 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 ZNF629Q9UEG4 869 aaPredicted RBP2.54□□□□□ -2
ATG4C-204ENST00000414558 PIN4Q9Y237 131 aaKnown RBP2.54□□□□□ -2
ATG4C-204ENST00000414558 LRP4O75096 1905 aa2.54□□□□□ -2
ATG4C-204ENST00000414558 NSG1A0A0A6YYJ2 146 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 PLAC8L1A1L4L8 177 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 C7orf66A4D0T2 115 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 LOC110117498-PIK3R3F6TDL0 507 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 NT5EP21589 574 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 HTR2AP28223 471 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 BTCP35070 178 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 GYG1P46976 350 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 GPM6AP51674 278 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 TNFRSF17Q02223 184 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 COX19Q49B96 90 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 TP53I3Q53FA7 332 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 COA6Q5JTJ3 125 aaKnown RBP2.53□□□□□ -2
ATG4C-204ENST00000414558 TPGS2Q68CL5 300 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 SHISA6Q6ZSJ9 500 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 NLRP9Q7RTR0 991 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 CLEC4FQ8N1N0 589 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 LRRC43Q8N309 656 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 OR2G3Q8NGZ4 309 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 ACTRT1Q8TDG2 376 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 RIT2Q99578 217 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 RIOK2Q9BVS4 552 aaKnown RBP2.53□□□□□ -2
ATG4C-204ENST00000414558 POPDC2Q9HBU9 364 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 NOX3Q9HBY0 568 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 SLC40A1Q9NP59 571 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 KCNIP1Q9NZI2 227 aa2.53□□□□□ -2
ATG4C-204ENST00000414558 KIR2DS1A0A191URI9 304 aa2.52□□□□□ -2.01
ATG4C-204ENST00000414558 RBMY1BA6NDE4 496 aaKnown RBP2.52□□□□□ -2.01
ATG4C-204ENST00000414558 RBMY1EA6NEQ0 496 aaKnown RBP2.52□□□□□ -2.01
ATG4C-204ENST00000414558 ZNF705GA8MUZ8 300 aaPredicted RBP2.52□□□□□ -2.01
ATG4C-204ENST00000414558 F8WDY8 70 aa2.52□□□□□ -2.01
ATG4C-204ENST00000414558 TAPBPO15533 448 aa2.52□□□□□ -2.01
ATG4C-204ENST00000414558 SEC22BO75396 215 aa2.52□□□□□ -2.01
ATG4C-204ENST00000414558 SCGB2A1O75556 95 aa2.52□□□□□ -2.01
ATG4C-204ENST00000414558 IGHG4P01861 327 aa2.52□□□□□ -2.01
ATG4C-204ENST00000414558 RBMY1DP0C7P1 496 aaKnown RBP2.52□□□□□ -2.01
ATG4C-204ENST00000414558 ZDHHC11BP0C7U3 371 aa2.52□□□□□ -2.01
ATG4C-204ENST00000414558 RBMY1A1P0DJD3 496 aaKnown RBP2.52□□□□□ -2.01
ATG4C-204ENST00000414558 PSMC3P17980 439 aa2.52□□□□□ -2.01
ATG4C-204ENST00000414558 OMGP23515 440 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms