RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 MALT1Q9UDY8 824 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 RNF115Q9Y4L5 304 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 RAI1Q7Z5J4 1906 aaPredicted RBP9.89□□□□□ -0.83
RFFL-204ENST00000414419 HIVEP1P15822 2718 aa9.89□□□□□ -0.83
RFFL-204ENST00000414419 TRAV36DV7A0A075B6V5 113 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 A0A087WUJ7 227 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 A0A0B4J2E0 115 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 A0A1B0GX12 115 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 OR6C65A6NJZ3 312 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 OR5H1A6NKK0 313 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 M0R3H8 397 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 AIM2O14862 343 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 ARHGEF9O43307 516 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 IFNA14P01570 189 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 LOXP28300 417 aaPredicted RBP9.88□□□□□ -0.83
RFFL-204ENST00000414419 HOXC12P31275 282 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 NTF4P34130 210 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 C1DQ13901 141 aaKnown RBP9.88□□□□□ -0.83
RFFL-204ENST00000414419 RABL3Q5HYI8 236 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 NCMAPQ5T1S8 102 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 SWT1Q5T5J6 900 aaKnown RBP9.88□□□□□ -0.83
RFFL-204ENST00000414419 C9orf135Q5VTT2 229 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 ERICH5Q6P6B1 374 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 C10orf53Q8N6V4 93 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 POMGNT2Q8NAT1 580 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 OR52N5Q8NH56 324 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 RP9Q8TA86 221 aaKnown RBP9.88□□□□□ -0.83
RFFL-204ENST00000414419 VANGL1Q8TAA9 524 aaPredicted RBP9.88□□□□□ -0.83
RFFL-204ENST00000414419 C10orf82Q8WW14 230 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 AKAP1Q92667 903 aaKnown RBP eCLIP9.88□□□□□ -0.83
RFFL-204ENST00000414419 PROX1Q92786 737 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 TAAR8Q969N4 342 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 ZNF385AQ96PM9 386 aaKnown RBP9.88□□□□□ -0.83
RFFL-204ENST00000414419 ZNF317Q96PQ6 595 aaPredicted RBP9.88□□□□□ -0.83
RFFL-204ENST00000414419 PIP5K1AQ99755 562 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 ARHGDIGQ99819 225 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 PTDSS2Q9BVG9 487 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 RSPO3Q9BXY4 272 aaPredicted RBP9.88□□□□□ -0.83
RFFL-204ENST00000414419 SLCO5A1Q9H2Y9 848 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 SLC7A10Q9NS82 523 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 ARMCX1Q9P291 453 aa9.88□□□□□ -0.83
RFFL-204ENST00000414419 CPSF4LA6NMK7 179 aaKnown RBP9.87□□□□□ -0.83
RFFL-204ENST00000414419 FTCDNL1E5RQL4 147 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 HS3ST1O14792 307 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 FMO6PO60774 539 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 PLAUP00749 431 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 CD99P14209 185 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 NQO1P15559 274 aaKnown RBP9.87□□□□□ -0.83
RFFL-204ENST00000414419 CDH2P19022 906 aaPredicted RBP9.87□□□□□ -0.83
RFFL-204ENST00000414419 CD247P20963 164 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 CBLP22681 906 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 MPGP29372 298 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 P2RY4P51582 365 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 CDH12P55289 794 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 NKX6-1P78426 367 aaPredicted RBP9.87□□□□□ -0.83
RFFL-204ENST00000414419 BSPH1Q075Z2 132 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 VEZF1Q14119 521 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 NRF1Q16656 503 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 ENTPD8Q5MY95 495 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 TSPO2Q5TGU0 170 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 NIPAL3Q6P499 406 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 ZNF613Q6PF04 617 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 KLHL17Q6TDP4 642 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 KLHL24Q6TFL4 600 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 CREB3L2Q70SY1 520 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 H1FNTQ75WM6 255 aaPredicted RBP9.87□□□□□ -0.83
RFFL-204ENST00000414419 CCDC80Q76M96 950 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 TGIF2LYQ8IUE0 185 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 KDM8Q8N371 416 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 POU5F2Q8N7G0 328 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 ZIC4Q8N9L1 334 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 OR6T1Q8NGN1 323 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 TMEM171Q8WVE6 324 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 FBXW5Q969U6 566 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 TAMM41Q96BW9 452 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 RCN3Q96D15 328 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 MUS81Q96NY9 551 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 OXGR1Q96P68 337 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 ASPNQ9BXN1 380 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 BAG5Q9UL15 447 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 B3GALT5Q9Y2C3 310 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 AP3M1Q9Y2T2 418 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 CORINQ9Y5Q5 1042 aa9.87□□□□□ -0.83
RFFL-204ENST00000414419 AKAP9Q99996 3911 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 IGKV1D-42A0A075B6H8 117 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 A0A1W2PR80 420 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 DPRXA6NFQ7 191 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ZNF587BE7ETH6 402 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 M0R082 166 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 FXYD1O00168 92 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 CHP2O43745 196 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 AKAP8O43823 692 aaKnown RBP9.86□□□□□ -0.83
RFFL-204ENST00000414419 TPST2O60704 377 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ITGA5P08648 1049 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 GRPRP30550 384 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 SELENOPP49908 381 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 GZMMP51124 257 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 CLDN17P56750 224 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 ADAM8P78325 824 aa9.86□□□□□ -0.83
RFFL-204ENST00000414419 GABRA6Q16445 453 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms