RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 GHDCQ8N2G8 530 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 OR5W2Q8NH69 310 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 CD300LFQ8TDQ1 290 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 FCRL1Q96LA6 429 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 DPH1Q9BZG8 443 aa7.85□□□□□ -1.15
SYNE1-211ENST00000413186 QRSL1Q9H0R6 528 aaKnown RBP7.85□□□□□ -1.15
SYNE1-211ENST00000413186 A0A1W2PPW3 197 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 PRICKLE3O43900 615 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 SERPINA7P05543 415 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ACP1P24666 158 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 HSD11B1P28845 292 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 TACR3P29371 465 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 GGT2P36268 569 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 NCS1P62166 190 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 HOXC5Q00444 222 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF691Q5VV52 312 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 OR5M10Q6IEU7 315 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 RPTNQ6XPR3 784 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ANKRD37Q7Z713 158 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 GPALPP1Q8IXQ4 340 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 SLC43A2Q8N370 569 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 AMER3Q8N944 861 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 NUDT8Q8WV74 236 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 NRTNQ99748 197 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 LAT2Q9GZY6 243 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 A0A1B0GWA3 101 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 KIAA1324LA8MWY0 1029 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 SLC16A6O15403 523 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ACP2P11117 423 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ELAVL4P26378 380 aaKnown RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 PIGAP37287 484 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 TSPAN31Q12999 210 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 NHSL2Q5HYW2 709 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 UBE3DQ7Z6J8 389 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ATCAYQ86WG3 371 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ANKK1Q8NFD2 765 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 HAVCR2Q8TDQ0 301 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 TSEN15Q8WW01 171 aaKnown RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 TMEM121BQ9BXQ6 578 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 CST11Q9H112 138 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 INIPQ9NRY2 104 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 DNAJC27Q9NZQ0 273 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 LOC100509620A0A075B734 347 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 DLL1O00548 723 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 EIF1BO60739 113 aaKnown RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 MBP02144 154 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 MT-ND2P03891 347 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 CRABP1P29762 137 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 SUMO3P55854 103 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 WNT3P56703 355 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 SLC35A1P78382 337 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 SRYQ05066 204 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF628Q5EBL2 1059 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 FAM199XQ6PEV8 388 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF836Q6ZNA1 936 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 DPY19L4Q7Z388 723 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 TIPARPQ7Z3E1 657 aaKnown RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 OR9Q2Q8NGE9 314 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 CNIH3Q8TBE1 160 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 SPACA9Q96E40 222 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF471Q9BX82 626 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 TMEM185BQ9H7F4 350 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 LIN28AQ9H9Z2 209 aaKnown RBP7.84□□□□□ -1.15
SYNE1-211ENST00000413186 LAMP5Q9UJQ1 280 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 USP22Q9UPT9 525 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 CACNA1EQ15878 2313 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 CROCCQ5TZA2 2017 aa7.84□□□□□ -1.15
SYNE1-211ENST00000413186 TRAV36DV7A0A075B6V5 113 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 TMED7-TICAM2A0A0A6YYA0 188 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 A8MVM7 634 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 SBK2P0C263 348 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 UGT2B10P36537 528 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 APOBEC1P41238 236 aaKnown RBP7.84□□□□□ -1.16
SYNE1-211ENST00000413186 DNASE1L1P49184 302 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 VLDLRP98155 873 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 MRPL49Q13405 166 aaKnown RBP7.84□□□□□ -1.16
SYNE1-211ENST00000413186 OR7A5Q15622 319 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 EEF1A1P5Q5VTE0 462 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 ABHD12BQ7Z5M8 362 aaPredicted RBP7.84□□□□□ -1.16
SYNE1-211ENST00000413186 MARCH3Q86UD3 253 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 AKAP14Q86UN6 197 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 OR4D6Q8NGJ1 314 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 THAP4Q8WY91 577 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 ST8SIA1Q92185 356 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 CNOT9Q92600 299 aaKnown RBP7.84□□□□□ -1.16
SYNE1-211ENST00000413186 SAMD8Q96LT4 415 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 TMED7Q9Y3B3 224 aa7.84□□□□□ -1.16
SYNE1-211ENST00000413186 PHYHO14832 338 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 XPNPEP2O43895 674 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 SUSD5O60279 629 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 ITGA10O75578 1167 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 WDPCPO95876 746 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 TSTQ16762 297 aaKnown RBP7.83□□□□□ -1.16
SYNE1-211ENST00000413186 PRICKLE4Q2TBC4 344 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 DEFB109BQ30KR1 87 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 TMEM201Q5SNT2 666 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 UNQ6126/PRO20091Q6UXV3 157 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 LINC00299Q6ZSB3 139 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF676Q8N7Q3 588 aa7.83□□□□□ -1.16
SYNE1-211ENST00000413186 OR6T1Q8NGN1 323 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms