RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NHLRC3Q5JS37 347 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 HLA-DQA1Q5Y7H0 255 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 NDUFAF7Q7L592 441 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 OR4N5Q8IXE1 308 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF619Q8N2I2 560 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 LYSMD1Q96S90 227 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 UFSP2Q9NUQ7 469 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 MRPS33Q9Y291 106 aaKnown RBP12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 DSPPQ9NZW4 1301 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 RPS10-NUDT3A0A1W2PQS6 291 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 TRIM77I1YAP6 450 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 GPR31O00270 319 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 VEGFDO43915 354 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 INHAP05111 366 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 YOD1Q5VVQ6 348 aaPredicted RBP12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 PRAMEF8Q5VWM4 474 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 PRAMEF7Q5VXH5 474 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 CD200R1LQ6Q8B3 271 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 WFDC5Q8TCV5 224 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 GPATCH2Q9NW75 528 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 PCDHB10Q9UN67 800 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 SF3B6Q9Y3B4 125 aaKnown RBP12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 INSL5Q9Y5Q6 135 aa12.86□□□□□ -0.35
CLTCL1-201ENST00000412649 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 H3BNC9 293 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 CCSO14618 274 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 BCL2L11O43521 198 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 POU3F2P20265 443 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 CPT2P23786 658 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 CSF2RBP32927 897 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 LIMS1P48059 325 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 SNRPEP62304 92 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 RAB33AQ14088 237 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 C1orf189Q5VU69 101 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 SLC16A13Q7RTY0 426 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 MCATQ8IVS2 390 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF565Q8N9K5 539 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 LMLNQ96KR4 655 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 SHARPINQ9H0F6 387 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 DPEP2Q9H4A9 486 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 NPIPA5A0A0B4J1W7 369 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 MANSC4A6NHS7 340 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 NPIPA7E9PJI5 369 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 TSTD3H0UI37 97 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 GMFGO60234 142 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 PTP4A3O75365 173 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 VNN2O95498 520 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 NPIPA8P0DM63 369 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 OR8G3PP0DMU2 310 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 RBMXP38159 391 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 CAMLGP49069 296 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 C14orf28Q4W4Y0 310 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 TMEM71Q6P5X7 295 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 TECPR1Q7Z6L1 1165 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 YAF2Q8IY57 180 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 MACROD1Q9BQ69 325 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 KCNJ16Q9NPI9 418 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 FAM74A7A6NL05 159 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 GSTZ1O43708 216 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 PRAMEF4O60810 478 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 AK1P00568 194 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 S1PR1P21453 382 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 KLF9Q13886 244 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 GPNMBQ14956 572 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 UBXN2BQ14CS0 331 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 FAM74A3Q4VXF1 159 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 PRAMEF9Q5VWM5 478 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF425Q6IV72 752 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 OR2L5Q8NG80 312 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 OR6S1Q8NH40 331 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 CMTM3Q96MX0 182 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 CMSS1Q9BQ75 279 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 CPNE7Q9UBL6 633 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 C14orf166Q9Y224 244 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 RNF215Q9Y6U7 377 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 SCAMP1O15126 338 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 PRKRAO75569 313 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 RAB6AP20340 208 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 HIST1H1TP22492 207 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 PSMB5P28074 263 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 IRF5Q13568 498 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 MPEG1Q2M385 716 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 OR2W3Q7Z3T1 314 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 OR4K17Q8NGC6 315 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 OR4C16Q8NGL9 310 aa12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF587Q96SQ5 575 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-201ENST00000412649 SLC5A10A0PJK1 596 aa12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 M0QYG6 137 aa12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 TAS2R31P59538 309 aa12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 CORO6Q6QEF8 472 aa12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 OR51D1Q8NGF3 324 aa12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 ZFPM2Q8WW38 1151 aa12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 ATOH1Q92858 354 aaPredicted RBP12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 ZNF251Q9BRH9 671 aa12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 ORAI3Q9BRQ5 295 aa12.84□□□□□ -0.35
CLTCL1-201ENST00000412649 PITHD1Q9GZP4 211 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms