RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SLC1A1P43005 524 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 TSFMP43897 325 aaKnown RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 RGRP47804 291 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 PRKXP51817 358 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 CCNHP51946 323 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 ERVK-16P61578 105 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 RPS14P62263 151 aaKnown RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 MRPS22P82650 360 aaKnown RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 CCDC173Q0VFZ6 552 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 STX3Q13277 289 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 OXA1LQ15070 435 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 VWA2Q5GFL6 755 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 FAM219BQ5XKK7 198 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 PVRIGQ6DKI7 326 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 CLEC6AQ6EIG7 209 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 FAM199XQ6PEV8 388 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 MBOAT1Q6ZNC8 495 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 JAGN1Q8N5M9 183 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 MS4A15Q8N5U1 240 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 TTC29Q8NA56 475 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 SUMF1Q8NBK3 374 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 OR9A4Q8NGU2 314 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 FNDC8Q8TC99 324 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 MYDGFQ969H8 173 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 MRGPRFQ96AM1 343 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 FAM131CQ96AQ9 280 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 CHID1Q9BWS9 393 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 UCK2Q9BZX2 261 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 NAT10Q9H0A0 1025 aaKnown RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 GBA3Q9H227 469 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 GOLPH3Q9H4A6 298 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 BEX1Q9HBH7 125 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 TMEM165Q9HC07 324 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 FGF20Q9NP95 211 aaPredicted RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 PRSS16Q9NQE7 514 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 THUMPD1Q9NXG2 353 aaKnown RBP3.72□□□□□ -1.81
BRCA1-204ENST00000412061 ENPP5Q9UJA9 477 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 POFUT2Q9Y2G5 429 aa3.72□□□□□ -1.81
BRCA1-204ENST00000412061 TRAV6A0A075B6T7 132 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 PP2D1A8MPX8 630 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 RSPH10B2B2RC85 870 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 E7ESA3 106 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 GOSR2O14653 212 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CALUO43852 315 aaPredicted RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 HSBP1O75506 76 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 AP2A2O94973 939 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 LYPD3O95274 346 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 ETHE1O95571 254 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 HLA-HP01893 362 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 RSPH10BP0C881 870 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 PRSS56P0CW18 603 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 HSD17B1P14061 328 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 IDSP22304 550 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 UGT1A4P22310 534 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 GABRR2P28476 465 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 VHLP40337 213 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 LEPP41159 167 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 KPNA2P52292 529 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 LIM2P55344 173 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 MYL6P60660 151 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 UBE2MP61081 183 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 SKP1P63208 163 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CTAG1AP78358 180 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 IL18R1Q13478 541 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 ART3Q13508 389 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 GRB7Q14451 532 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 NECTIN1Q15223 517 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 TEAD2Q15562 447 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 VAMP3Q15836 100 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CYP51A1Q16850 503 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 HLA-BQ31612 363 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 REP15Q6BDI9 236 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 ZNF470Q6ECI4 717 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 SLC25A48Q6ZT89 311 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 PGAP1Q75T13 922 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 PID1Q7Z2X4 250 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 FAM122BQ7Z309 247 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 NUFIP2Q7Z417 695 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 APOBEC3FQ8IUX4 373 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CMTM1Q8IZ96 169 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 MYOCDQ8IZQ8 938 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 IQCKQ8N0W5 287 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 RAB42Q8N4Z0 105 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 OR52B6Q8NGF0 335 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 LYPD6BQ8NI32 183 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 C17orf50Q8WW18 174 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 TCTEX1D2Q8WW35 142 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CAPSLQ8WWF8 208 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 MRPS31Q92665 395 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CCDC124Q96CT7 223 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CNRIP1Q96F85 164 aaPredicted RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CELF6Q96J87 481 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 PRAC1Q96KF2 57 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 C9orf72Q96LT7 481 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 FOXN4Q96NZ1 517 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 OXGR1Q96P68 337 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 CYP2S1Q96SQ9 504 aa3.71□□□□□ -1.81
BRCA1-204ENST00000412061 NAPGQ99747 312 aaPredicted RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 UPF3BQ9BZI7 483 aaKnown RBP3.71□□□□□ -1.81
BRCA1-204ENST00000412061 PPDPFQ9H3Y8 114 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms