RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PPM1LQ5SGD2 360 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 ZNF57Q68EA5 555 aaPredicted RBP4.04□□□□□ -1.76
LSM5-205ENST00000409952 OR52E8Q6IFG1 317 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.04□□□□□ -1.761e-10■■■□□ 17.1
LSM5-205ENST00000409952 ASCL5Q7RTU5 278 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 FAM122BQ7Z309 247 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 TIPARPQ7Z3E1 657 aaKnown RBP4.04□□□□□ -1.76
LSM5-205ENST00000409952 ZNF100Q8IYN0 542 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 ARHGAP18Q8N392 663 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 SUMF1Q8NBK3 374 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 ITFG2Q969R8 447 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 NABP1Q96AH0 204 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 MRGPRFQ96AM1 343 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 ZNF317Q96PQ6 595 aaPredicted RBP4.04□□□□□ -1.76
LSM5-205ENST00000409952 CYP2S1Q96SQ9 504 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 HSD17B14Q9BPX1 270 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 TMEM204Q9BSN7 226 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 UCK2Q9BZX2 261 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 HIPK2Q9H2X6 1198 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 MOB1AQ9H8S9 216 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 ZC4H2Q9NQZ6 224 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 TXLNGQ9NUQ3 528 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 WARS2Q9UGM6 360 aaKnown RBP4.04□□□□□ -1.76
LSM5-205ENST00000409952 RARRES3Q9UL19 164 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 MGAT4AQ9UM21 535 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 SAMD4AQ9UPU9 718 aaKnown RBP4.04□□□□□ -1.76
LSM5-205ENST00000409952 SLC17A4Q9Y2C5 497 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 SAR1BQ9Y6B6 198 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 TTC3P53804 2025 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 USP6P35125 1406 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 SOX15O60248 233 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 HSBP1O75506 76 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 SMC2O95347 1197 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 FARS2O95363 451 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 ETHE1O95571 254 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 DDOSTP39656 456 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 LIM2P55344 173 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 ATP5J2P56134 94 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 CYCSP99999 105 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 ILF3Q12906 894 aaKnown RBP eCLIP4.03□□□□□ -1.76
LSM5-205ENST00000409952 PSG3Q16557 428 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 SOHLH1Q5JUK2 328 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 FFAR4Q5NUL3 377 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 ZNF836Q6ZNA1 936 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 TRMT10CQ7L0Y3 403 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 APOBEC3FQ8IUX4 373 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 SLC39A11Q8N1S5 342 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 BEST4Q8NFU0 473 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 CAPSLQ8WWF8 208 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 CRYGNQ8WXF5 182 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 GTF3AQ92664 365 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 MYDGFQ969H8 173 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 OXGR1Q96P68 337 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 TSSK3Q96PN8 268 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 ECSITQ9BQ95 431 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 WACQ9BTA9 647 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 ACTR3CQ9C0K3 210 aaPredicted RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 NTN4Q9HB63 628 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 MRPL47Q9HD33 250 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 FGF20Q9NP95 211 aaPredicted RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 DMAP1Q9NPF5 467 aaPredicted RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 ABCC13Q9NSE7 274 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 ZNF446Q9NWS9 450 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 PAK1IP1Q9NWT1 392 aaPredicted RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 THUMPD1Q9NXG2 353 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 UXTQ9UBK9 157 aaPredicted RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 ZNF229Q9UJW7 825 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 GGA2Q9UJY4 613 aa4.03□□□□□ -1.76
LSM5-205ENST00000409952 LSM7Q9UK45 103 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 RPL36Q9Y3U8 105 aaKnown RBP4.03□□□□□ -1.76
LSM5-205ENST00000409952 PLEKHH1Q9ULM0 1364 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 EVPLQ92817 2033 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 MYO3BQ8WXR4 1341 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 MEX3AA1L020 520 aaKnown RBP4.02□□□□□ -1.77
LSM5-205ENST00000409952 PRSS37A4D1T9 235 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 TRABD2BA6NFA1 517 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 B4DXG7 233 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 K7EQG2 157 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 SULT2B1O00204 365 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 INSIG1O15503 277 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 FGF17O60258 216 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 EIF4E2O60573 245 aaKnown RBP4.02□□□□□ -1.77
LSM5-205ENST00000409952 CRYAAP02489 173 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 C2P06681 752 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 HOXD4P09016 255 aaPredicted RBP4.02□□□□□ -1.77
LSM5-205ENST00000409952 NR2C1P13056 603 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 PVRP15151 417 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 FASP25445 335 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 GABRR2P28476 465 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 UGT1A3P35503 534 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 ACVR1BP36896 505 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 PTGDSP41222 190 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 TNFSF9P41273 254 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 ARHGDIAP52565 204 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 EFNA3P52797 238 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 FBXW4P57775 412 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 SRPXP78539 464 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 PAX2Q02962 417 aa4.02□□□□□ -1.77
LSM5-205ENST00000409952 PUDPQ08623 228 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms