RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 C1DQ13901 141 aaKnown RBP12.17□□□□□ -0.46
LIMS1-204ENST00000409441 LY6DQ14210 128 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 FGFBP1Q14512 234 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 INPP5JQ15735 1006 aaPredicted RBP12.17□□□□□ -0.46
LIMS1-204ENST00000409441 CD226Q15762 336 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 TSTQ16762 297 aaKnown RBP12.17□□□□□ -0.46
LIMS1-204ENST00000409441 MRPL2Q5T653 305 aaKnown RBP12.17□□□□□ -0.46
LIMS1-204ENST00000409441 PCSK4Q6UW60 755 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.17□□□□□ -0.46
LIMS1-204ENST00000409441 TMCO5AQ8N6Q1 288 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 OR2M7Q8NG81 312 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 OR8D4Q8NGM9 314 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 MCFD2Q8NI22 146 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 SLC35B4Q969S0 331 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 WBP1Q96G27 269 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 LRR1Q96L50 414 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 JSRP1Q96MG2 331 aaPredicted RBP12.17□□□□□ -0.46
LIMS1-204ENST00000409441 FRMD6Q96NE9 622 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 FAM173AQ9BQD7 235 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 NXF2Q9GZY0 626 aaKnown RBP12.17□□□□□ -0.46
LIMS1-204ENST00000409441 TBCCD1Q9NVR7 557 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 TAS2R16Q9NYV7 291 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 SLC7A7Q9UM01 511 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 TMEM5Q9Y2B1 443 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 CORINQ9Y5Q5 1042 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 WIF1Q9Y5W5 379 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 CDH10Q9Y6N8 788 aa12.17□□□□□ -0.46
LIMS1-204ENST00000409441 EPG5Q9HCE0 2579 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 PINLYPA6NC86 204 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 C17orf51A8MQB3 221 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 TRIM3O75382 744 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-204ENST00000409441 CSTAP01040 98 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 HMGN1P05114 100 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 GRK5P34947 590 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 HOXC5Q00444 222 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 RAB40BQ12829 278 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 MLLT11Q13015 90 aaPredicted RBP12.16□□□□□ -0.46
LIMS1-204ENST00000409441 SPHARQ15513 63 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 PGGHGQ32M88 737 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 ZNF404Q494X3 552 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 ANKDD1AQ495B1 522 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 FNDC7Q5VTL7 733 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 ZNF620Q6ZNG0 422 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 ZBTB46Q86UZ6 589 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 IGFN1Q86VF2 1251 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 ATCAYQ86WG3 371 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 GRAMD2AQ8IUY3 354 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 MISPQ8IVT2 679 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 NRMQ8IXM6 262 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 CMIPQ8IY22 773 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 WDSUB1Q8N9V3 476 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 OR52I1Q8NGK6 324 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 RFKQ969G6 155 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 GNRHR2Q96P88 292 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 OPALINQ96PE5 141 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 PRSS27Q9BQR3 290 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 ZNF559Q9BR84 538 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 DSN1Q9H410 356 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 ISYNA1Q9NPH2 558 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 PPP4R1LQ9P1A2 415 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 CARD8Q9Y2G2 431 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 NTNG1Q9Y2I2 539 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 CACNA1BQ00975 2339 aa12.16□□□□□ -0.46
LIMS1-204ENST00000409441 J3QRK9 145 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 GNB5O14775 395 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 MYL12BO14950 172 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 ZNF264O43296 627 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 IDUAP35475 653 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 MEOX1P50221 254 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 FOXO1Q12778 655 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 OR1Q1Q15612 314 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 NDUFAF6Q330K2 333 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 SLC6A19Q695T7 634 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 TIGD3Q6B0B8 471 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 RPL13AP3Q6NVV1 102 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 ZNF613Q6PF04 617 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 MFSD4AQ8N468 514 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 TEX19Q8NA77 164 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 ANKK1Q8NFD2 765 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 OR9Q1Q8NGQ5 310 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 OR1J4Q8NGS1 313 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 CHPT1Q8WUD6 406 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 TMEM255BQ8WV15 326 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 CNOT9Q92600 299 aaKnown RBP12.15□□□□□ -0.46
LIMS1-204ENST00000409441 PNPLA2Q96AD5 504 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 PPP1R14BQ96C90 147 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 TMEM41AQ96HV5 264 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 HS6ST2Q96MM7 605 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 SIAEQ9HAT2 523 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 HHATLQ9HCP6 504 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 ZFP64Q9NPA5 681 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 CHCHD3Q9NX63 227 aaKnown RBP12.15□□□□□ -0.46
LIMS1-204ENST00000409441 ETAA1Q9NY74 926 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 MED11Q9P086 117 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 SEC14L4Q9UDX3 406 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 LHX6Q9UPM6 363 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 SLC35A3Q9Y2D2 325 aa12.15□□□□□ -0.46
LIMS1-204ENST00000409441 EXOSC1Q9Y3B2 195 aaKnown RBP12.15□□□□□ -0.46
LIMS1-204ENST00000409441 LOC100506127A0A0U1RQW1 187 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms