RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 ARSBP15848 533 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 PSMB10P40306 273 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 AGFG1P52594 562 aaKnown RBP15.37■□□□□ 0.05
NUP50-203ENST00000407019 DEFB133Q30KQ1 61 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 HSD17B12Q53GQ0 312 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 Q96M85 177 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 ABHD1Q96SE0 405 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 PDCD1LG2Q9BQ51 273 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 NXF5Q9H1B4 397 aaKnown RBP15.37■□□□□ 0.05
NUP50-203ENST00000407019 ABCG5Q9H222 651 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 LMAN1LQ9HAT1 526 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 NANSQ9NR45 359 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 CUTCQ9NTM9 273 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 CACNG2Q9Y698 323 aa15.37■□□□□ 0.05
NUP50-203ENST00000407019 A8MUA0 341 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 FAM47E-STBD1D6RA91 191 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 CD14P08571 375 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 SRFP11831 508 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 APEHP13798 732 aaKnown RBP15.36■□□□□ 0.05
NUP50-203ENST00000407019 RORAP35398 523 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 KCNAB1Q14722 419 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 CEP78Q5JTW2 689 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 LINC01590Q5TEZ4 76 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 NKAIN2Q5VXU1 208 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 BICRALQ6AI39 1079 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 CBLN3Q6UW01 205 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 LYPD4Q6UWN0 246 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 SYT9Q86SS6 491 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 TMEM151BQ8IW70 566 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 YIPF7Q8N8F6 280 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 ZDHHC12Q96GR4 267 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 MOGAT1Q96PD6 335 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 ALG12Q9BV10 488 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 OR8D2Q9GZM6 311 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 BRD7Q9NPI1 651 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 RPRD1BQ9NQG5 326 aaKnown RBP15.36■□□□□ 0.05
NUP50-203ENST00000407019 CLEC4AQ9UMR7 237 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 A0A1B0GVT2 93 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 FRG2CA6NGY1 282 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 OR6C70A6NIJ9 312 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 ZNF879B4DU55 563 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 CPNE3O75131 537 aaKnown RBP15.36■□□□□ 0.05
NUP50-203ENST00000407019 UBL3O95164 117 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 S100A1P23297 94 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 CDKN2AP42771 156 aaKnown RBP15.36■□□□□ 0.05
NUP50-203ENST00000407019 SLC25A1P53007 311 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 RRAS2P62070 204 aaPredicted RBP15.36■□□□□ 0.05
NUP50-203ENST00000407019 BTG1P62324 171 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 PLA1AQ53H76 456 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 ALG10Q5BKT4 473 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 UNQ9370/PRO34162Q6UXP9 181 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 TTLL10Q6ZVT0 673 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 FAM122BQ7Z309 247 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 LRRC75AQ8NAA5 344 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 LSM14AQ8ND56 463 aaKnown RBP15.36■□□□□ 0.05
NUP50-203ENST00000407019 PHYHIPQ92561 330 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 GFM1Q96RP9 751 aaKnown RBP15.36■□□□□ 0.05
NUP50-203ENST00000407019 TMEM246Q9BRR3 403 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 RAB33BQ9H082 229 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 MMP25Q9NPA2 562 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 RXFP3Q9NSD7 469 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 MRTO4Q9UKD2 239 aaKnown RBP15.36■□□□□ 0.05
NUP50-203ENST00000407019 BOLA1Q9Y3E2 137 aa15.36■□□□□ 0.05
NUP50-203ENST00000407019 A0A0B4J203 849 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 OR2B3O76000 313 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 GRPRP30550 384 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 SDHAP31040 664 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 OR1D4P47884 311 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 CTXN1P60606 82 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 PITPNAQ00169 270 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 C14orf28Q4W4Y0 310 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 APOOLQ6UXV4 268 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 KRT74Q7RTS7 529 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 RPS4Y2Q8TD47 263 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 TSLPQ969D9 159 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 LCORQ96JN0 433 aaPredicted RBP15.35■□□□□ 0.05
NUP50-203ENST00000407019 OR1F2PQ96R84 312 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 PLSCR3Q9NRY6 295 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 ING3Q9NXR8 418 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 AK6Q9Y3D8 172 aaKnown RBP15.35■□□□□ 0.05
NUP50-203ENST00000407019 CEP290O15078 2479 aa15.35■□□□□ 0.05
NUP50-203ENST00000407019 ANKRD61A6NGH8 418 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 C4orf47A7E2U8 309 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 RHPN2P1A8MT19 583 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 FAM171A2A8MVW0 826 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 LMO7DNF2Z398 122 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 ASAH2BP0C7U1 165 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 MST1P26927 711 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 EPHA4P54764 986 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 RACK1P63244 317 aaKnown RBP15.34■□□□□ 0.05
NUP50-203ENST00000407019 NTRK2Q16620 822 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 BAIAP2L2Q6UXY1 529 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 SLC35F3Q8IY50 421 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 OR4D9Q8NGE8 314 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 ZNF563Q8TA94 476 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 AKAP1Q92667 903 aaKnown RBP eCLIP15.34■□□□□ 0.05
NUP50-203ENST00000407019 SPATA2Q9UM82 520 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 MOKQ9UQ07 419 aa15.34■□□□□ 0.05
NUP50-203ENST00000407019 SPTBN5Q9NRC6 3674 aaKnown RBP15.34■□□□□ 0.05
NUP50-203ENST00000407019 IGKV3D-11A0A0A0MRZ8 115 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms