RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ARMC8Q8IUR7 673 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 PIAS4Q8N2W9 510 aaPredicted RBP11.7□□□□□ -0.54
SDF4-203ENST00000403997 KDM8Q8N371 416 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 DPP10Q8N608 796 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 LSMEM1Q8N8F7 131 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 POMGNT2Q8NAT1 580 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 C11orf65Q8NCR3 313 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 BHLHE22Q8NFJ8 381 aaPredicted RBP11.7□□□□□ -0.54
SDF4-203ENST00000403997 TSPEARQ8WU66 669 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 DNAJA4Q8WW22 397 aaPredicted RBP11.7□□□□□ -0.54
SDF4-203ENST00000403997 GTPBP3Q969Y2 492 aaKnown RBP11.7□□□□□ -0.54
SDF4-203ENST00000403997 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 CGREF1Q99674 301 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 TRIM2Q9C040 744 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 TMEM27Q9HBJ8 222 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 CISD1Q9NZ45 108 aaKnown RBP11.7□□□□□ -0.54
SDF4-203ENST00000403997 SELENONQ9NZV5 590 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 NF1P21359 2839 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 VPS13CQ709C8 3753 aa11.7□□□□□ -0.54
SDF4-203ENST00000403997 SHISA9B4DS77 424 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 M0R1B8 84 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 SMAD7O15105 426 aaKnown RBP11.69□□□□□ -0.54
SDF4-203ENST00000403997 OR2T1O43869 369 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 MFN2O95140 757 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 PNMTP11086 282 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 PTAFRP25105 342 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 RGS8P57771 180 aaPredicted RBP11.69□□□□□ -0.54
SDF4-203ENST00000403997 MTPNP58546 118 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 EGR4Q05215 589 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 ALG10BQ5I7T1 473 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 ULK3Q6PHR2 472 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 SLC22A25Q6T423 547 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 Q71RC1 249 aaPredicted RBP11.69□□□□□ -0.54
SDF4-203ENST00000403997 ABHD12BQ7Z5M8 362 aaPredicted RBP11.69□□□□□ -0.54
SDF4-203ENST00000403997 CIARTQ8N365 385 aaPredicted RBP11.69□□□□□ -0.54
SDF4-203ENST00000403997 WDR31Q8NA23 367 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 SMYD1Q8NB12 490 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 C1orf162Q8NEQ5 155 aaPredicted RBP11.69□□□□□ -0.54
SDF4-203ENST00000403997 SLC47A1Q96FL8 570 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
SDF4-203ENST00000403997 RADILQ96JH8 1075 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 PTDSS2Q9BVG9 487 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 TMEM120AQ9BXJ8 343 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 C12orf10Q9HB07 376 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 SLC17A5Q9NRA2 495 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 MGAT4BQ9UQ53 548 aa11.69□□□□□ -0.54
SDF4-203ENST00000403997 TRIM64A6NGJ6 449 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 TRIM64BA6NI03 449 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 FTCDNL1E5RQL4 147 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 M0QX08 132 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 OVOL3O00110 214 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 DANCRP0C864 163 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 TROVE2P10155 538 aaKnown RBP eCLIP11.68□□□□□ -0.54
SDF4-203ENST00000403997 ZNF43P17038 809 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 CBLP22681 906 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 CD40P25942 277 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 SELENOPP49908 381 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 CDH11P55287 796 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 CLDN17P56750 224 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 PRPS1P60891 318 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 LGALS3BPQ08380 585 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 DMTNQ08495 405 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 RBBP4Q09028 425 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.545e-6■■■■■ 35.2
SDF4-203ENST00000403997 SELPLGQ14242 412 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 OR1Q1Q15612 314 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 PGGHGQ32M88 737 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 NIPAL3Q6P499 406 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 KLHL24Q6TFL4 600 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 C5orf46Q6UWT4 87 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 CLEC9AQ6UXN8 241 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 PTOV1Q86YD1 416 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 EPHX4Q8IUS5 362 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 DEPDC4Q8N2C3 294 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 C17orf78Q8N4C9 275 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 SLC38A4Q969I6 547 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 TAAR8Q969N4 342 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 OXGR1Q96P68 337 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 AMBRA1Q9C0C7 1298 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 ALG2Q9H553 416 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 EVA1AQ9H8M9 152 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 TESQ9UGI8 421 aaKnown RBP11.68□□□□□ -0.54
SDF4-203ENST00000403997 POU2F3Q9UKI9 436 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 AMDHD2Q9Y303 409 aa11.68□□□□□ -0.54
SDF4-203ENST00000403997 MAGED1Q9Y5V3 778 aaPredicted RBP11.68□□□□□ -0.54
SDF4-203ENST00000403997 ABCA2Q9BZC7 2435 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 TRAV36DV7A0A075B6V5 113 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 OR6C65A6NJZ3 312 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 FAM171A2A8MVW0 826 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 ZNF587BE7ETH6 402 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 AIM2O14862 343 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 VIMP08670 466 aaKnown RBP11.67□□□□□ -0.54
SDF4-203ENST00000403997 CDKN1AP38936 164 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 ARFIP2P53365 341 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 PCBP3P57721 371 aaKnown RBP11.67□□□□□ -0.54
SDF4-203ENST00000403997 IL1RL1Q01638 556 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 C1DQ13901 141 aaKnown RBP11.67□□□□□ -0.54
SDF4-203ENST00000403997 FAM69AQ5T7M9 428 aa11.67□□□□□ -0.54
SDF4-203ENST00000403997 FAM91A1Q658Y4 838 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms