RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ZNF585AQ6P3V2 769 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 ZDHHC21Q8IVQ6 265 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 CADM2Q8N3J6 435 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 C9orf106Q8NAJ2 232 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 POMGNT2Q8NAT1 580 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 SGTBQ96EQ0 304 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 TRIB1Q96RU8 372 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 NPAS1Q99742 590 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 ENKD1Q9H0I2 346 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 CXorf56Q9H5V9 222 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 NMNAT1Q9HAN9 279 aaPredicted RBP6.71□□□□□ -1.34
USP16-204ENST00000399976 DNAJB9Q9UBS3 223 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 MALT1Q9UDY8 824 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 Q9UFV3 132 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 FBXL3Q9UKT7 428 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 RNF6Q9Y252 685 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 NBEAQ8NFP9 2946 aa6.71□□□□□ -1.34
USP16-204ENST00000399976 PDLIM1O00151 329 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 PLPP3O14495 311 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 LRRTM2O43300 516 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 CXCL13O43927 109 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 EPXP11678 715 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 SHC1P29353 583 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 KIR2DL2P43627 348 aaPredicted RBP6.7□□□□□ -1.34
USP16-204ENST00000399976 VLDLRP98155 873 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 PON3Q15166 354 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 IGFBP7Q16270 282 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 OR2T5Q6IEZ7 315 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 ZNF770Q6IQ21 691 aaPredicted RBP6.7□□□□□ -1.34
USP16-204ENST00000399976 P4HA3Q7Z4N8 544 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 VTCN1Q7Z7D3 282 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 GALNT5Q7Z7M9 940 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 TSPYL5Q86VY4 417 aaPredicted RBP6.7□□□□□ -1.34
USP16-204ENST00000399976 KIF18BQ86Y91 864 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 CDK20Q8IZL9 346 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 SVOPLQ8N434 492 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 OR2T29Q8NH02 315 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 TPD52L3Q96J77 140 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 OR5B2Q96R09 309 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 EGFL7Q9UHF1 273 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 TINAGQ9UJW2 476 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 MGAT4BQ9UQ53 548 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 SH3GLB1Q9Y371 365 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 FLVCR1Q9Y5Y0 555 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 LYVE1Q9Y5Y7 322 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 CFAP47Q6ZTR5 3102 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 FKBP6O75344 327 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 ZNF432O94892 652 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 ADAP00813 363 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 NCK1P16333 377 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 PSMB1P20618 241 aaKnown RBP6.7□□□□□ -1.34
USP16-204ENST00000399976 EIF1AXP47813 144 aaKnown RBP6.7□□□□□ -1.34
USP16-204ENST00000399976 OMPP47874 163 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 UQCRFS1P47985 274 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 SF3A3Q12874 501 aaKnown RBP eCLIP6.7□□□□□ -1.34
USP16-204ENST00000399976 ATP6AP1Q15904 470 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 HIST3H3Q16695 136 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 WDR88Q6ZMY6 472 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 LRRC75AQ8NAA5 344 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 OR9K2Q8NGE7 335 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 OR6X1Q8NH79 312 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 GNPDA2Q8TDQ7 276 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 ROBO4Q8WZ75 1007 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 TAAR8Q969N4 342 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 STARD4Q96DR4 205 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 WFDC6Q9BQY6 131 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 ALG12Q9BV10 488 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 MEPEQ9NQ76 525 aaPredicted RBP6.7□□□□□ -1.34
USP16-204ENST00000399976 GPR52Q9Y2T5 361 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 ATMQ13315 3056 aa6.7□□□□□ -1.34
USP16-204ENST00000399976 RAI1Q7Z5J4 1906 aaPredicted RBP6.7□□□□□ -1.34
USP16-204ENST00000399976 ARPC4-TTLL3A0A0A6YYG9 625 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 CPSF4LA6NMK7 179 aaKnown RBP6.69□□□□□ -1.34
USP16-204ENST00000399976 A8MXE2 369 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 DEAF1O75398 565 aaPredicted RBP6.69□□□□□ -1.34
USP16-204ENST00000399976 WISP2O76076 250 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 GADD45GO95257 159 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 FPR1P21462 350 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 GTF2E2P29084 291 aaKnown RBP6.69□□□□□ -1.34
USP16-204ENST00000399976 DNAJA1P31689 397 aaKnown RBP6.69□□□□□ -1.34
USP16-204ENST00000399976 STARP49675 285 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 DAP3P51398 398 aaKnown RBP6.69□□□□□ -1.34
USP16-204ENST00000399976 UGT2B15P54855 530 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 TSPAN31Q12999 210 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 TMEM201Q5SNT2 666 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 OTUD3Q5T2D3 398 aaPredicted RBP6.69□□□□□ -1.34
USP16-204ENST00000399976 GPR139Q6DWJ6 353 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 TFAP2EQ6VUC0 442 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 DEF8Q6ZN54 512 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 Q6ZT83 130 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 FOXL2NBQ6ZUU3 175 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 STK32CQ86UX6 486 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 PARP8Q8N3A8 854 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 ZNF845Q96IR2 970 aaPredicted RBP6.69□□□□□ -1.34
USP16-204ENST00000399976 CLPTM1LQ96KA5 538 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 ARL5BQ96KC2 179 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 TSPAN10Q9H1Z9 355 aaPredicted RBP6.69□□□□□ -1.34
USP16-204ENST00000399976 B3GAT1Q9P2W7 334 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 ZNF407Q9C0G0 2248 aa6.69□□□□□ -1.34
USP16-204ENST00000399976 ZGRF1Q86YA3 2104 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms