RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 FOXG1P55316 489 aaPredicted RBP13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 RGS8P57771 180 aaPredicted RBP13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 MTPNP58546 118 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 TGFBR3Q03167 851 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 DMTNQ08495 405 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 SELPLGQ14242 412 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 TRMT5Q32P41 509 aaKnown RBP13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 ZNF672Q499Z4 452 aaPredicted RBP13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 COQ5Q5HYK3 327 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 ALG10BQ5I7T1 473 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 FAM69AQ5T7M9 428 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 ULK3Q6PHR2 472 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 CREB3L2Q70SY1 520 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 AAED1Q7RTV5 226 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 ABHD12BQ7Z5M8 362 aaPredicted RBP13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 GPAT4Q86UL3 456 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 SLC38A4Q969I6 547 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 KTI12Q96EK9 354 aaPredicted RBP13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 PERPQ96FX8 193 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 BOD1Q96IK1 185 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 FGFR1OP2Q9NVK5 253 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 SLC13A4Q9UKG4 626 aa13.08□□□□□ -0.32
SMIM11A-203ENST00000399299 A0A0B4J2E0 115 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 A0A1B0GX12 115 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 OR6C65A6NJZ3 312 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 FMO6PO60774 539 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 C8BP07358 591 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 DANCRP0C864 163 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 PTAFRP25105 342 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 GTF2E2P29084 291 aaKnown RBP13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 RPS5P46782 204 aaKnown RBP13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 SWT1Q5T5J6 900 aaKnown RBP13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 TMEM108Q6UXF1 575 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 PATL1Q86TB9 770 aaKnown RBP13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 RANBP3LQ86VV4 465 aaPredicted RBP13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 KBTBD8Q8NFY9 601 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 OR6S1Q8NH40 331 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 SLC47A1Q96FL8 570 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 RADILQ96JH8 1075 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 C18orf12Q96KH6 178 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 CCDC134Q9H6E4 229 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 TMEM27Q9HBJ8 222 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 MGAT4BQ9UQ53 548 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 AMDHD2Q9Y303 409 aa13.07□□□□□ -0.32
SMIM11A-203ENST00000399299 IGKV1D-42A0A075B6H8 117 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 TRAV36DV7A0A075B6V5 113 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 A0A087WUJ7 227 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 SHISA9B4DS77 424 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 OVOL3O00110 214 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 FBP2O00757 339 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 ABCD4O14678 606 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 AIM2O14862 343 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 LGI1O95970 557 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 NPPAP01160 153 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 PCGF2P35227 344 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 ARFIP2P53365 341 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 RPS4XP62701 263 aaKnown RBP13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 CYLC2Q14093 348 aaPredicted RBP13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 MFSD13AQ14CX5 517 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 OR1Q1Q15612 314 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 NRF1Q16656 503 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 INTS11Q5TA45 600 aaKnown RBP13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 CGB2Q6NT52 195 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 KLHL17Q6TDP4 642 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 YTHDF3Q7Z739 585 aaKnown RBP13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 BIVMQ86UB2 503 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 EPHX4Q8IUS5 362 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 ADPRHL1Q8NDY3 354 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 OR52N5Q8NH56 324 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 SMAP2Q8WU79 429 aaPredicted RBP13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 TAAR8Q969N4 342 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 SLC25A36Q96CQ1 311 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 EPYCQ99645 322 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 ARHGDIGQ99819 225 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 SLC17A5Q9NRA2 495 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 SELENONQ9NZV5 590 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 LAMP3Q9UQV4 416 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 RCE1Q9Y256 329 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 B3GALT5Q9Y2C3 310 aa13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 MAGED1Q9Y5V3 778 aaPredicted RBP13.06□□□□□ -0.32
SMIM11A-203ENST00000399299 LOC102725191A0A1B0GVB3 256 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 BBIP1A8MTZ0 92 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 M0QX08 132 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 TPST2O60704 377 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 VIMP08670 466 aaKnown RBP13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 SELENOPP49908 381 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 KLF10Q13118 480 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 MAPRE2Q15555 327 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 DUSP7Q16829 419 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 HSP90B2PQ58FF3 399 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 ZNF613Q6PF04 617 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 WDR31Q8NA23 367 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 SMYD1Q8NB12 490 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 OR8J3Q8NGG0 315 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 OR10A6Q8NH74 314 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 NEUROG1Q92886 237 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 Q96MF0 132 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 OXGR1Q96P68 337 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 SH3GL1Q99961 368 aa13.05□□□□□ -0.32
SMIM11A-203ENST00000399299 WFDC6Q9BQY6 131 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms