RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 DCST2Q5T1A1 773 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 UNQ9370/PRO34162Q6UXP9 181 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 SYS1Q8N2H4 156 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 ZNF614Q8N883 585 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 OR2T27Q8NH04 317 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 C10orf90Q96M02 699 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 PTCHD1Q96NR3 888 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 PRSS16Q9NQE7 514 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
APOB-202ENST00000399256 PLEKHM1Q9Y4G2 1056 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 HMSDA8MTL9 139 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 ACOT7O00154 380 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 NID1P14543 1247 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 SORDQ00796 357 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 ARHGAP11AQ6P4F7 1023 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 SFTPA1Q8IWL2 248 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 OR5M9Q8NGP3 310 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 BADQ92934 168 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 PELOQ9BRX2 385 aaKnown RBP12.84□□□□□ -0.35
APOB-202ENST00000399256 IL21RQ9HBE5 538 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 TMEM138Q9NPI0 162 aa12.84□□□□□ -0.35
APOB-202ENST00000399256 A0A1B0GVT2 93 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 WDPCPO95876 746 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 AGR2O95994 175 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 DBIP07108 87 aaKnown RBP12.83□□□□□ -0.36
APOB-202ENST00000399256 NGFRP08138 427 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 ZNF888P0CJ79 500 aaPredicted RBP12.83□□□□□ -0.36
APOB-202ENST00000399256 SLC6A6P31641 620 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 NANOS3P60323 173 aaKnown RBP12.83□□□□□ -0.36
APOB-202ENST00000399256 CTAG1AP78358 180 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 IL10RAQ13651 578 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 UBXN2BQ14CS0 331 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 DHCR24Q15392 516 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 PCGF3Q3KNV8 242 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 FAM74A1Q5RGS3 127 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 C11orf88Q6PI97 169 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 EID2Q8N6I1 236 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 OR2L3Q8NG85 312 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 OR4D10Q8NGI6 311 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 OR52E1Q8NGJ3 308 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 OR6K6Q8NGW6 343 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 ING5Q8WYH8 240 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 RGP1Q92546 391 aaPredicted RBP12.83□□□□□ -0.36
APOB-202ENST00000399256 LRRC46Q96FV0 321 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 UTP23Q9BRU9 249 aaKnown RBP12.83□□□□□ -0.36
APOB-202ENST00000399256 ZNF350Q9GZX5 532 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 CAPN10Q9HC96 672 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 KLF15Q9UIH9 416 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 MAFFQ9ULX9 164 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 ADAM18Q9Y3Q7 739 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 SCN2AQ99250 2005 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 IGLON5A6NGN9 336 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 DNAJB6O75190 326 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 MTRF1O75570 445 aaKnown RBP12.83□□□□□ -0.36
APOB-202ENST00000399256 SOX2P48431 317 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 ART1P52961 327 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 ADAMTSL4Q6UY14 1074 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 SLC36A1Q7Z2H8 476 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 MUC20Q8N307 709 aaPredicted RBP12.83□□□□□ -0.36
APOB-202ENST00000399256 OR2AK2Q8NG84 335 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 SLC7A5P2Q9GIP4 190 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 SLC6A15Q9H2J7 730 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 IER3IP1Q9Y5U9 82 aa12.83□□□□□ -0.36
APOB-202ENST00000399256 TP53BP1Q12888 1972 aaPredicted RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 MEIS3P1A6NDR6 274 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 FAM171A2A8MVW0 826 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 H3BSH0 61 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 SULT1B1O43704 296 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 RNGTTO60942 597 aaKnown RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 HPP00738 406 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 ITPKBP27987 946 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 FNTBP49356 437 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 PLAURQ03405 335 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 FGL2Q14314 439 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 SHEQ5VZ18 495 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 LILRA6Q6PI73 481 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 PAQR7Q86WK9 346 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 SHISA5Q8N114 240 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 OR2L13Q8N349 312 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 COX18Q8N8Q8 333 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 CLRN3Q8NCR9 226 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 OR4C16Q8NGL9 310 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 ZCCHC10Q8TBK6 192 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 STK35Q8TDR2 534 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 HAVCR1Q96D42 359 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 HSPA12BQ96MM6 686 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 MFFQ9GZY8 342 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 HPF1Q9NWY4 346 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 ZFPL1O95159 310 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 LAG3P18627 525 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 RAB3AP20336 220 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 AK4P27144 223 aaPredicted RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 PEBP1P30086 187 aaKnown RBP12.82□□□□□ -0.36
APOB-202ENST00000399256 GXYLT1Q4G148 440 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 TMEM52BQ4KMG9 183 aa12.82□□□□□ -0.36
APOB-202ENST00000399256 OR2L8Q8NGY9 312 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms