RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 AQP4P55087 323 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 LRRC36Q1X8D7 754 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 ZNF311Q5JNZ3 666 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 WBP2NLQ6ICG8 309 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 ZBTB49Q6ZSB9 765 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 KRT73Q86Y46 540 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 NFKBIDQ8NI38 313 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 NINJ1Q92982 152 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 FAM162AQ96A26 154 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 SPATA5L1Q9BVQ7 753 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 CHID1Q9BWS9 393 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 OR10A4Q9H209 315 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 C12orf49Q9H741 205 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 KLHL28Q9NXS3 571 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 RPS6KA6Q9UK32 745 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 ITGB1BP2Q9UKP3 347 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 ANGPT4Q9Y264 503 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 FREM1Q5H8C1 2179 aa12.96□□□□□ -0.34
SEC13-208ENST00000397109 IGHV3-15A0A0B4J1V0 119 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 ZNF724A8MTY0 619 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 SMAD9O15198 467 aaKnown RBP12.95□□□□□ -0.34
SEC13-208ENST00000397109 PRSS23O95084 383 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 HRGP04196 525 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 CXCR1P25024 350 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 CCKARP32238 428 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 ACAA2P42765 397 aaKnown RBP12.95□□□□□ -0.34
SEC13-208ENST00000397109 PDK3Q15120 406 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 HMBOX1Q6NT76 420 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 STAC2Q6ZMT1 411 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 CCDC80Q76M96 950 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 NUFIP2Q7Z417 695 aaKnown RBP12.95□□□□□ -0.34
SEC13-208ENST00000397109 CLIP4Q8N3C7 705 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 ARL5BQ96KC2 179 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 PSD2Q9BQI7 771 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 OSBPL10Q9BXB5 764 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 HDHD5Q9BXW7 423 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 EMC3Q9P0I2 261 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 USP22Q9UPT9 525 aa12.95□□□□□ -0.34
SEC13-208ENST00000397109 TMEM72A0PK05 275 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 CLOCKO15516 846 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 EIF1BO60739 113 aaKnown RBP12.94□□□□□ -0.34
SEC13-208ENST00000397109 GCM2O75603 506 aaPredicted RBP12.94□□□□□ -0.34
SEC13-208ENST00000397109 CCNA2P20248 432 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 PSMB1P20618 241 aaKnown RBP12.94□□□□□ -0.34
SEC13-208ENST00000397109 CRYGSP22914 178 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 PRKAR1BP31321 381 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 DNAJA1P31689 397 aaKnown RBP12.94□□□□□ -0.34
SEC13-208ENST00000397109 OR2B6P58173 313 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 SLC35A1P78382 337 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 TFAP2EQ6VUC0 442 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 PIGXQ8TBF5 258 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 PYURFQ96I23 114 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 ZNF607Q96SK3 696 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 USB1Q9BQ65 265 aaKnown RBP12.94□□□□□ -0.34
SEC13-208ENST00000397109 NAA11Q9BSU3 229 aaPredicted RBP12.94□□□□□ -0.34
SEC13-208ENST00000397109 POTEKPQ9BYX7 375 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 OR11A1Q9GZK7 315 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 PIF1Q9H611 641 aa12.94□□□□□ -0.34
SEC13-208ENST00000397109 IGKV3D-15A0A087WSY6 115 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 GPR171O14626 319 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 KDELR2P33947 212 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 GTF2A1P52655 376 aaPredicted RBP12.93□□□□□ -0.34
SEC13-208ENST00000397109 CRYBA2P53672 197 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 BLMHQ13867 455 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 ABLIM2Q6H8Q1 611 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 GALNT5Q7Z7M9 940 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 AMIGO2Q86SJ2 522 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 PATL1Q86TB9 770 aaKnown RBP12.93□□□□□ -0.34
SEC13-208ENST00000397109 CADM2Q8N3J6 435 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 STEAP2Q8NFT2 490 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 DNAJB9Q9UBS3 223 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 ST6GALNAC2Q9UJ37 374 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 ING1Q9UK53 422 aaPredicted RBP12.93□□□□□ -0.34
SEC13-208ENST00000397109 CHST2Q9Y4C5 530 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 OTOGQ6ZRI0 2925 aa12.93□□□□□ -0.34
SEC13-208ENST00000397109 SERPINB7O75635 380 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 DNASE1P24855 282 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 OR3A2P47893 321 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 P2RY6Q15077 328 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 ANKRD34AQ69YU3 496 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 DHRS4L2Q6PKH6 230 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 GABRG1Q8N1C3 465 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 SVOPLQ8N434 492 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 NRGNQ92686 78 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 SLC47A1Q96FL8 570 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 RDH12Q96NR8 316 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 SEPHS2Q99611 448 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 SEMA6AQ9H2E6 1030 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 EVA1AQ9H8M9 152 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 SCOCQ9UIL1 159 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 CSMD2Q7Z408 3487 aa12.92□□□□□ -0.34
SEC13-208ENST00000397109 A8MVM7 634 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 MFN2O95140 757 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 CNOT4O95628 575 aaKnown RBP12.91□□□□□ -0.34
SEC13-208ENST00000397109 PRG2P13727 222 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 KLK2P20151 261 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 IDUAP35475 653 aa12.91□□□□□ -0.34
SEC13-208ENST00000397109 MAGEA2P43356 314 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms