RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CCDC182A6NF36 153 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 LIPT2A6NK58 231 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 TLX3O43711 291 aaPredicted RBP11.45□□□□□ -0.58
TRIM39-204ENST00000396548 IGHMP01871 453 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 STSP08842 583 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 HIST1H1CP16403 213 aaKnown RBP11.45□□□□□ -0.58
TRIM39-204ENST00000396548 DPP4P27487 766 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 SHC1P29353 583 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 P2RY4P51582 365 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 ST3GAL4Q11206 333 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 ZP4Q12836 540 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 SLC35F1Q5T1Q4 408 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 ARHGAP11AQ6P4F7 1023 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 BORAQ6PGQ7 559 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 MAMDC2Q7Z304 686 aaPredicted RBP11.45□□□□□ -0.58
TRIM39-204ENST00000396548 OR5J2Q8NH18 312 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 TUBA1CQ9BQE3 449 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 NMNAT2Q9BZQ4 307 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 ACOT13Q9NPJ3 140 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 TIMMDC1Q9NPL8 285 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 PLA2G3Q9NZ20 509 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 SLC6A5Q9Y345 797 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 KIAA1549Q9HCM3 1950 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 MS4A18H0YCH9 400 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 OR2T1O43869 369 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 SEC14L2O76054 403 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 F10P00742 488 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 PRKAR1AP10644 381 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 GRPRP30550 384 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 MAP2K4P45985 399 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 MFAP5Q13361 173 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 DOC2BQ14184 412 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 OR1C1Q15619 314 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF239Q16600 458 aaKnown RBP11.45□□□□□ -0.58
TRIM39-204ENST00000396548 MS4A18Q3C1V0 323 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 AGAP7PQ5VUJ5 663 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 C3orf33Q6P1S2 294 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 NIPAL3Q6P499 406 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 CPOQ8IVL8 374 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 SLC37A3Q8NCC5 494 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 NPEPL1Q8NDH3 523 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 MYDGFQ969H8 173 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 AGAP4Q96P64 663 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 ERMAPQ96PL5 475 aaPredicted RBP11.45□□□□□ -0.58
TRIM39-204ENST00000396548 TEX12Q9BXU0 123 aa11.45□□□□□ -0.58
TRIM39-204ENST00000396548 EXOGQ9Y2C4 368 aaKnown RBP11.45□□□□□ -0.58
TRIM39-204ENST00000396548 BLOC1S5-TXNDC5H3BN57 136 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 CD14P08571 375 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 HK1P19367 917 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 FKBP2P26885 142 aaKnown RBP11.44□□□□□ -0.58
TRIM39-204ENST00000396548 HTR1FP30939 366 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SRD5A2P31213 254 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 CLK1P49759 484 aaKnown RBP11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SELENBP1Q13228 472 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 ITGADQ13349 1161 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 RAB39AQ14964 217 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 ALG10Q5BKT4 473 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 UBE2UQ5VVX9 321 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 CXXC5Q7LFL8 322 aaKnown RBP11.44□□□□□ -0.58
TRIM39-204ENST00000396548 EXD3Q8N9H8 876 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 OR2M7Q8NG81 312 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 OR13F1Q8NGS4 319 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 HAS2Q92819 552 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 LGALS12Q96DT0 336 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SCMH1Q96GD3 660 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 TSPAN32Q96QS1 320 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 KATNB1Q9BVA0 655 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 HES7Q9BYE0 225 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 CXorf56Q9H5V9 222 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 FGF20Q9NP95 211 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-204ENST00000396548 WDR70Q9NW82 654 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 KLHL21Q9UJP4 597 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 CEPT1Q9Y6K0 416 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 FAM183AA6NL82 134 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF891A8MT65 544 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SPINK2P20155 84 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 NOS3P29474 1203 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 GP2P55259 537 aaKnown RBP11.44□□□□□ -0.58
TRIM39-204ENST00000396548 ERVK-25P63136 954 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SLC6A19Q695T7 634 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 LINC00696Q6ZRV3 163 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SCAIQ8N9R8 606 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 OR52I1Q8NGK6 324 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SLC39A7Q92504 469 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 DNAJA3Q96EY1 480 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 ZNF649Q9BS31 505 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 OR2B2Q9GZK3 357 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 FAM192AQ9GZU8 254 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 MED20Q9H944 212 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 NME2P1O60361 137 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 GLSO94925 669 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-204ENST00000396548 AHSA1O95433 338 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 NME2P22392 152 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 FOXC1Q12948 553 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 MYBPHQ13203 477 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 CRMP1Q14194 572 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 PLBD1Q6P4A8 553 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 NANOGNBQ7Z5D8 188 aa11.44□□□□□ -0.58
TRIM39-204ENST00000396548 SULF2Q8IWU5 870 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms