RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 LTBQ06643 244 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ALG10Q5BKT4 473 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 WDR45BQ5MNZ6 344 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 PRAMEF17Q5VTA0 474 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 MZT2BQ6NZ67 158 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 LEG1Q6P5S2 330 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 UNQ9370/PRO34162Q6UXP9 181 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 PRR23CQ6ZRP0 262 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ZNF441Q8N8Z8 693 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 DUSP18Q8NEJ0 188 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 THAP4Q8WY91 577 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 PHYHIPQ92561 330 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ZNF501Q96CX3 271 aaPredicted RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 Q96M85 177 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 GAL3ST4Q96RP7 486 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 NDEL1Q9GZM8 345 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 MMP28Q9H239 520 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 MOV10Q9HCE1 1003 aaKnown RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 RBFOX1Q9NWB1 397 aaKnown RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 EXTL2Q9UBQ6 330 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 RASD1Q9Y272 281 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 A0A1W2PRG6 482 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 HMX3A6NHT5 357 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 BLOC1S5-TXNDC5H3BN57 136 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 GPRIN2O60269 458 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ARL6IP5O75915 188 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 UCHL1P09936 223 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 FAM157BP0CG42 384 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 PRKAR1AP10644 381 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 RAB3BP20337 219 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 TACR3P29371 465 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 IL12BP29460 328 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 OR10A3P58181 314 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 RPS11P62280 158 aaKnown RBP eCLIP15.29■□□□□ 0.04
NUP50-202ENST00000396096 SF3A2Q15428 464 aaKnown RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 NSDHLQ15738 373 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 VWA2Q5GFL6 755 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ZNF684Q5T5D7 378 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ARHGAP40Q5TG30 622 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 HLA-DQA1Q5Y7H0 255 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 PTCRAQ6ISU1 281 aaPredicted RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 JAZF1Q86VZ6 243 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 SIX5Q8N196 739 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 SCAIQ8N9R8 606 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 OR1N1Q8NGS0 311 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 LPAR4Q99677 370 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ALG12Q9BV10 488 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 RTN4RQ9BZR6 473 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 WWTR1Q9GZV5 400 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 ZNF768Q9H5H4 540 aaKnown RBP15.29■□□□□ 0.04
NUP50-202ENST00000396096 RNF121Q9H920 327 aa15.29■□□□□ 0.04
NUP50-202ENST00000396096 FER1L5A0AVI2 2057 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 K7ESF4 209 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 DDOSTP39656 456 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 PNLIPRP2P54317 469 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 CTXN1P60606 82 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 ZP2Q05996 745 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 MADCAM1Q13477 382 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 SNAP47Q5SQN1 464 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 RSBN1Q5VWQ0 802 aaPredicted RBP15.28■□□□□ 0.04
NUP50-202ENST00000396096 PRR22Q8IZ63 422 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 C10orf53Q8N6V4 93 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 Q8N9G6 341 aaPredicted RBP15.28■□□□□ 0.04
NUP50-202ENST00000396096 LSM14AQ8ND56 463 aaKnown RBP15.28■□□□□ 0.04
NUP50-202ENST00000396096 PLPP5Q8NEB5 264 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 OR13C5Q8NGS8 318 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 ZNF563Q8TA94 476 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 ENKURQ8TC29 256 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 HLA-CQ95604 372 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 KTI12Q96EK9 354 aaPredicted RBP15.28■□□□□ 0.04
NUP50-202ENST00000396096 FRMD6Q96NE9 622 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 KLHDC3Q9BQ90 382 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 VN1R1Q9GZP7 353 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 FKRPQ9H9S5 495 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 COPS7AQ9UBW8 275 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 GNG8Q9UK08 70 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 ZNF221Q9UK13 617 aa15.28■□□□□ 0.04
NUP50-202ENST00000396096 A0A1B0GVT2 93 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 MAGEB4O15481 346 aaPredicted RBP15.27■□□□□ 0.04
NUP50-202ENST00000396096 CDC40O60508 579 aaKnown RBP eCLIP15.27■□□□□ 0.04
NUP50-202ENST00000396096 EIF4EP06730 217 aaKnown RBP15.27■□□□□ 0.04
NUP50-202ENST00000396096 TALDO1P37837 337 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 QPRTQ15274 297 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 SLC16A9Q7RTY1 509 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 OVCH1Q7RTY7 1134 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 OR4M1Q8NGD0 313 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 OR6K6Q8NGW6 343 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 DPYSL5Q9BPU6 564 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 TTTY10Q9BZA0 68 aa15.27■□□□□ 0.04
NUP50-202ENST00000396096 A0A0G2JMP0 313 aa15.27■□□□□ 0.03
NUP50-202ENST00000396096 TRBV2A0A0J9YWF9 115 aa15.27■□□□□ 0.03
NUP50-202ENST00000396096 A0A0X1KG70 313 aa15.27■□□□□ 0.03
NUP50-202ENST00000396096 NOTOA8MTQ0 251 aa15.27■□□□□ 0.03
NUP50-202ENST00000396096 TOX3O15405 576 aaPredicted RBP15.27■□□□□ 0.03
NUP50-202ENST00000396096 LYRM1O43325 122 aa15.27■□□□□ 0.03
NUP50-202ENST00000396096 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.03
NUP50-202ENST00000396096 EDNRAP25101 427 aa15.27■□□□□ 0.03
NUP50-202ENST00000396096 NR0B1P51843 470 aaKnown RBP15.27■□□□□ 0.03
NUP50-202ENST00000396096 RPL18Q07020 188 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms