RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PTTG3PQ9NZH4 202 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 CNOT2Q9NZN8 540 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 MRTO4Q9UKD2 239 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 RAXQ9Y2V3 346 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 AUP1Q9Y679 476 aa6.34□□□□□ -1.39
RTN4-205ENST00000394609 RIF1Q5UIP0 2472 aaKnown RBP6.34□□□□□ -1.39
RTN4-205ENST00000394609 KIF26BQ2KJY2 2108 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 CUL9Q8IWT3 2517 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 A0A0B4J2E0 115 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 IQCMA0A1B0GVH7 501 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 A0A1B0GX12 115 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 A0A1W2PNU3 283 aaPredicted RBP6.33□□□□□ -1.4
RTN4-205ENST00000394609 C9J4A7 227 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 TO15178 435 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 MPZL2O60487 215 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 TSPAN2O60636 221 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 ZNF780AO75290 641 aaPredicted RBP6.33□□□□□ -1.4
RTN4-205ENST00000394609 MTRF1O75570 445 aaKnown RBP6.33□□□□□ -1.4
RTN4-205ENST00000394609 LCKP06239 509 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 IFI30P13284 250 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 CTRB1P17538 263 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 MAKP20794 623 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 TBXA2RP21731 343 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 GTF2E2P29084 291 aaKnown RBP6.33□□□□□ -1.4
RTN4-205ENST00000394609 GIPRP48546 466 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 GZMKP49863 264 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 E2F1Q01094 437 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 FAPQ12884 760 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 TSPAN31Q12999 210 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 BAMBIQ13145 260 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 GINS1Q14691 196 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 NCF4Q15080 339 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 CSRP2Q16527 193 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 FNDC7Q5VTL7 733 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 CTRB2Q6GPI1 263 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 ACSM5Q6NUN0 579 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 ZNF613Q6PF04 617 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 TMEM205Q6UW68 189 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 ZNF550Q7Z398 422 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 BCDIN3DQ7Z5W3 292 aaKnown RBP6.33□□□□□ -1.4
RTN4-205ENST00000394609 CMIPQ8IY22 773 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 OR8D4Q8NGM9 314 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 ZNF524Q96C55 264 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 CEP19Q96LK0 163 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 CDC6Q99741 560 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 DPH1Q9BZG8 443 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 TRIM2Q9C040 744 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 SEMA4CQ9C0C4 833 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 WDR54Q9H977 334 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 MEPEQ9NQ76 525 aaPredicted RBP6.33□□□□□ -1.4
RTN4-205ENST00000394609 TVP23BQ9NYZ1 205 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 NCDNQ9UBB6 729 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 TNFRSF10DQ9UBN6 386 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 RPS6KB2Q9UBS0 482 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 SEC14L4Q9UDX3 406 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 NXT1Q9UKK6 140 aaKnown RBP6.33□□□□□ -1.4
RTN4-205ENST00000394609 AHCTF1Q8WYP5 2266 aa6.33□□□□□ -1.4
RTN4-205ENST00000394609 LINC00862A6NCI5 91 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 CCDC182A6NF36 153 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 EFCAB10A6NFE3 127 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 ZSCAN5BA6NJL1 495 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 TMEM200CA6NKL6 621 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 MASP2O00187 686 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 CCRL2O00421 344 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 ZNF264O43296 627 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 KLF4O43474 513 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 HCRTR2O43614 444 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 CHP2O43745 196 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 PRKYO43930 277 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 MT-CO3P00414 261 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 HLA-DQB1P01920 261 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 NGFRP08138 427 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 CELA2AP08217 269 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 DBTP11182 482 aaKnown RBP6.32□□□□□ -1.4
RTN4-205ENST00000394609 PIPP12273 146 aaPredicted RBP6.32□□□□□ -1.4
RTN4-205ENST00000394609 GABRB1P18505 474 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 GSTM3P21266 225 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 FPR3P25089 353 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 RFX2P48378 723 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 FBXW4P57775 412 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 SLC26A5P58743 744 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 RPS18P62269 152 aaKnown RBP6.32□□□□□ -1.4
RTN4-205ENST00000394609 TRIP6Q15654 476 aaKnown RBP6.32□□□□□ -1.4
RTN4-205ENST00000394609 BTBD16Q32M84 506 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 RNLSQ5VYX0 342 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 OR5M10Q6IEU7 315 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 CASP12Q6UXS9 341 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 RASSF6Q6ZTQ3 369 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 AHSA2Q719I0 299 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 TIPARPQ7Z3E1 657 aaKnown RBP6.32□□□□□ -1.4
RTN4-205ENST00000394609 NRARPQ7Z6K4 114 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 SLC34A3Q8N130 599 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 TCEANCQ8N8B7 351 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 PRSS33Q8NF86 280 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 TOR1AIP2Q8NFQ8 470 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 TEX47Q8TBZ9 253 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 BPIFA2Q96DR5 249 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 LRFN5Q96NI6 719 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 TBL1XR1Q9BZK7 514 aa6.32□□□□□ -1.4
RTN4-205ENST00000394609 GPR83Q9NYM4 423 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms