RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 TIMM23BQ5SRD1 257 aa27.09■■□□□ 1.93
CMTM4-202ENST00000394106 TSPO2Q5TGU0 170 aa27.09■■□□□ 1.93
CMTM4-202ENST00000394106 C5orf46Q6UWT4 87 aa27.09■■□□□ 1.93
CMTM4-202ENST00000394106 CALHM3Q86XJ0 350 aa27.09■■□□□ 1.93
CMTM4-202ENST00000394106 RCN3Q96D15 328 aa27.09■■□□□ 1.93
CMTM4-202ENST00000394106 CCL19Q99731 98 aa27.09■■□□□ 1.93
CMTM4-202ENST00000394106 ESRP2Q9H6T0 727 aaKnown RBP27.09■■□□□ 1.93
CMTM4-202ENST00000394106 BEX4Q9NWD9 120 aaPredicted RBP27.09■■□□□ 1.93
CMTM4-202ENST00000394106 SEC14L4Q9UDX3 406 aa27.09■■□□□ 1.93
CMTM4-202ENST00000394106 USP22Q9UPT9 525 aa27.09■■□□□ 1.93
CMTM4-202ENST00000394106 TRAV36DV7A0A075B6V5 113 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 OR5H1A6NKK0 313 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 CLOCKO15516 846 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 OR2T1O43869 369 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 CD247P20963 164 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 CBLP22681 906 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 CDH12P55289 794 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 NCMAPQ5T1S8 102 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 FAM69AQ5T7M9 428 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 SEZ6L2Q6UXD5 910 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 C20orf204Q6ZNR8 217 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 KDM8Q8N371 416 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 OR6T1Q8NGN1 323 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 TMEM204Q9BSN7 226 aa27.08■■□□□ 1.93
CMTM4-202ENST00000394106 RAI1Q7Z5J4 1906 aaPredicted RBP27.08■■□□□ 1.93
CMTM4-202ENST00000394106 HIVEP1P15822 2718 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 A0A087WUJ7 227 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 CD3EP07766 207 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 ITGA5P08648 1049 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 NPTX1Q15818 432 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 CREB3L2Q70SY1 520 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 P2RY8Q86VZ1 359 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 OR52N5Q8NH56 324 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 SLCO5A1Q9H2Y9 848 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 RNF115Q9Y4L5 304 aa27.07■■□□□ 1.92
CMTM4-202ENST00000394106 CPSF4LA6NMK7 179 aaKnown RBP27.06■■□□□ 1.92
CMTM4-202ENST00000394106 M0R082 166 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 FMO6PO60774 539 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 CCDC22O60826 627 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 GRPRP30550 384 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 BSPH1Q075Z2 132 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 CCDC80Q76M96 950 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 RBM45Q8IUH3 476 aaKnown RBP27.06■■□□□ 1.92
CMTM4-202ENST00000394106 EPHX4Q8IUS5 362 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 OR4D11Q8NGI4 311 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 ZNF417Q8TAU3 575 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 PIGTQ969N2 578 aa27.06■■□□□ 1.92
CMTM4-202ENST00000394106 ZNF587Q96SQ5 575 aaPredicted RBP27.06■■□□□ 1.92
CMTM4-202ENST00000394106 A0A1W2PR80 420 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 AIM2O14862 343 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 KRT33AO76009 404 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 CRYBA2P53672 197 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 IL1RL1Q01638 556 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 GABRA6Q16445 453 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 ENTPD8Q5MY95 495 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 ERICH5Q6P6B1 374 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 RP9Q8TA86 221 aaKnown RBP27.05■■□□□ 1.92
CMTM4-202ENST00000394106 RASSF5Q8WWW0 418 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 AKAP1Q92667 903 aaKnown RBP eCLIP27.05■■□□□ 1.92
CMTM4-202ENST00000394106 ZNF583Q96ND8 569 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 EPYCQ99645 322 aa27.05■■□□□ 1.92
CMTM4-202ENST00000394106 ELAC2Q9BQ52 826 aaKnown RBP27.05■■□□□ 1.92
CMTM4-202ENST00000394106 TEP1Q99973 2627 aaKnown RBP27.04■■□□□ 1.92
CMTM4-202ENST00000394106 DPRXA6NFQ7 191 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 PDLIM1O00151 329 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 HS3ST1O14792 307 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 SMPD2O60906 423 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 SELENOPP49908 381 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 SEC24CP53992 1094 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 SWT1Q5T5J6 900 aaKnown RBP27.04■■□□□ 1.92
CMTM4-202ENST00000394106 OR7E24Q6IFN5 339 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 NIPAL3Q6P499 406 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 ZNF613Q6PF04 617 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 SPATA21Q7Z572 469 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 TGIF2LYQ8IUE0 185 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 C10orf53Q8N6V4 93 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 POMGNT2Q8NAT1 580 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 FAM107BQ9H098 131 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 NPAP1Q9NZP6 1156 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 DSCAMO60469 2012 aa27.04■■□□□ 1.92
CMTM4-202ENST00000394106 COX4I1P13073 169 aa27.03■■□□□ 1.92
CMTM4-202ENST00000394106 ZNF43P17038 809 aa27.03■■□□□ 1.92
CMTM4-202ENST00000394106 LGALS3BPQ08380 585 aa27.03■■□□□ 1.92
CMTM4-202ENST00000394106 C1DQ13901 141 aaKnown RBP27.03■■□□□ 1.92
CMTM4-202ENST00000394106 SSX8Q7RTT4 187 aa27.03■■□□□ 1.92
CMTM4-202ENST00000394106 PROX1Q92786 737 aa27.03■■□□□ 1.92
CMTM4-202ENST00000394106 MUS81Q96NY9 551 aa27.03■■□□□ 1.92
CMTM4-202ENST00000394106 OXGR1Q96P68 337 aa27.03■■□□□ 1.92
CMTM4-202ENST00000394106 PIP5K1AQ99755 562 aa27.03■■□□□ 1.92
CMTM4-202ENST00000394106 MED13LQ71F56 2210 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 ITPR3Q14573 2671 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 FAM220BPB1ANY3 271 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 FZD7O75084 574 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 CDH2P19022 906 aaPredicted RBP27.02■■□□□ 1.92
CMTM4-202ENST00000394106 MPGP29372 298 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 CLDN17P56750 224 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 ADAM8P78325 824 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 TGFBR3Q03167 851 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 VEZF1Q14119 521 aa27.02■■□□□ 1.92
CMTM4-202ENST00000394106 H1FNTQ75WM6 255 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms