RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MPP2Q14168 576 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 LARS2Q15031 903 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 TBRG1Q3YBR2 411 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 HIKESHIQ53FT3 197 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 MSANTD1Q6ZTZ1 278 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 GPAT4Q86UL3 456 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 ZNF540Q8NDQ6 660 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 OR1K1Q8NGR3 316 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 KCNS3Q9BQ31 491 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 PIMREGQ9BSJ6 248 aa15.24■□□□□ 0.03
SNRPA1-202ENST00000394082 SLCO1B7G3V0H7 640 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 RPL36A-HNRNPH2H7BZ11 118 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 FRS3O43559 492 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 KRT33AO76009 404 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 IGLV1-44P01699 117 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 GSNP06396 782 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 GKN3PP0CG01 181 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 IDO1P14902 403 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 NME5P56597 212 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 C1orf140Q5VVS0 124 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 FAM166AQ6J272 317 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 ANKRD16Q6P6B7 361 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 ZNF836Q6ZNA1 936 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 CROCCP2Q86T23 111 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 VRK2Q86Y07 508 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 OR4F15Q8NGB8 312 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 MFSD8Q8NHS3 518 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 SLC38A5Q8WUX1 472 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 BCL2L2Q92843 193 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 FBXO17Q96EF6 278 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 SORCS2Q96PQ0 1159 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 SPATA9Q9BWV2 254 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 THAP1Q9NVV9 213 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 ZNF232Q9UNY5 417 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 RCE1Q9Y256 329 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 ZNF443Q9Y2A4 671 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 IFT52Q9Y366 437 aa15.23■□□□□ 0.03
SNRPA1-202ENST00000394082 A0A0G2JPF8 293 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 TMEM229AB2RXF0 380 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 HNRNPCL2B2RXH8 293 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 HNRNPCL3B7ZW38 293 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 FTCDNL1E5RQL4 147 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 KLF11O14901 512 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 HNRNPCL1O60812 293 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 IGKV3-15P01624 115 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 HNRNPCL4P0DMR1 293 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 SELENOPP49908 381 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 PPOXP50336 477 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 UBE2NP61088 152 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 NAAAQ02083 359 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 PDCD4Q53EL6 469 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 PRAMEF8Q5VWM4 474 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 PRAMEF7Q5VXH5 474 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 EPHX4Q8IUS5 362 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 NUP37Q8NFH4 326 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 PNPT1Q8TCS8 783 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 C3orf49Q96BT1 292 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 MAELQ96JY0 434 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 PLK3Q9H4B4 646 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 TPT1P8Q9HAU6 139 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 ADPRHL2Q9NX46 363 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 KCNS2Q9ULS6 477 aa15.22■□□□□ 0.03
SNRPA1-202ENST00000394082 SNNO75324 88 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 SLC22A3O75751 556 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 LY6HO94772 140 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 LGI1O95970 557 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 ZNF16P17020 682 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 CDH2P19022 906 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 EPHA3P29320 983 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 DSTNP60981 165 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 ADIPOQQ15848 244 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 C5orf46Q6UWT4 87 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 C6orf89Q6UWU4 347 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 CADM2Q8N3J6 435 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 PRR14Q9BWN1 585 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 ZNF442Q9H7R0 627 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 RMND5AQ9H871 391 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 C12orf10Q9HB07 376 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 BCL2L10Q9HD36 194 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 SDR39U1Q9NRG7 319 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 SLC6A13Q9NSD5 602 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 ZIM2Q9NZV7 527 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 CHST2Q9Y4C5 530 aa15.21■□□□□ 0.03
SNRPA1-202ENST00000394082 MALRD1Q5VYJ5 2156 aa15.21■□□□□ 0.02
SNRPA1-202ENST00000394082 LOC102725191A0A1B0GVB3 256 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 TMEM247A6NEH6 219 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 VSTM5A8MXK1 200 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 ZNF432O94892 652 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 AHSA1O95433 338 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 BCHEP06276 602 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 OR4A8P0C604 315 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 CECR9P0C854 216 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 ETFAP13804 333 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 SRD5A1P18405 259 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 NCF2P19878 526 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 IGFBP5P24593 272 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 CRATP43155 626 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 BNIP2Q12982 314 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 NIPAL3Q6P499 406 aa15.2■□□□□ 0.02
SNRPA1-202ENST00000394082 LINGO2Q7L985 606 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms