RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 NEU4Q8WWR8 484 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-202ENST00000393773 PPP1R36Q96LQ0 422 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 DOK1Q99704 481 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 LINC00470Q9BZP3 86 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 DPY30Q9C005 99 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 AKTIPQ9H8T0 292 aa13.3□□□□□ -0.28
CHMP3-202ENST00000393773 MOV10Q9HCE1 1003 aaKnown RBP13.3□□□□□ -0.28
CHMP3-202ENST00000393773 FBXO9Q9UK97 447 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-202ENST00000393773 TMEM129A0AVI4 362 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 OR6C65A6NJZ3 312 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 KRT33AO76009 404 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 VENTXO95231 258 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 BPGMP07738 259 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 UQCRBP14927 111 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 NPR2P20594 1047 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 SH3BGRP55822 239 aaPredicted RBP13.29□□□□□ -0.28
CHMP3-202ENST00000393773 BNIP2Q12982 314 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 ANXA8L1Q5VT79 327 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 NIPAL3Q6P499 406 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 DEF8Q6ZN54 512 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 LRRC74BQ6ZQY2 392 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 CCDC115Q96NT0 180 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 RLIMQ9NVW2 624 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 ADPRHL2Q9NX46 363 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 LGALS13Q9UHV8 139 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 PCDHB14Q9Y5E9 798 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 DSPPQ9NZW4 1301 aa13.29□□□□□ -0.28
CHMP3-202ENST00000393773 IGHV2OR16-5A0A0B4J2B6 119 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 CDHR4A6H8M9 788 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 TMEM229AB2RXF0 380 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 SPRY1O43609 319 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-202ENST00000393773 NPIPB7O75200 414 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 VAMP5O95183 116 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 DBIP07108 87 aaKnown RBP13.28□□□□□ -0.28
CHMP3-202ENST00000393773 IL7RP16871 459 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 CXCR1P25024 350 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 ACAA2P42765 397 aaKnown RBP13.28□□□□□ -0.28
CHMP3-202ENST00000393773 ETV4P43268 484 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 ROR2Q01974 943 aaKnown RBP13.28□□□□□ -0.28
CHMP3-202ENST00000393773 CCNIQ14094 377 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 MAPK11Q15759 364 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 GSTA3Q16772 222 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 DPY19L1Q2PZI1 675 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 FAM174BQ3ZCQ3 159 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 ZNF836Q6ZNA1 936 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 SPATA21Q7Z572 469 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 RIBC1Q8N443 379 aaPredicted RBP13.28□□□□□ -0.28
CHMP3-202ENST00000393773 ZNF781Q8N8C0 355 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 VPS37AQ8NEZ2 397 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 ZFAND2BQ8WV99 257 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 BTNL2Q9UIR0 455 aa13.28□□□□□ -0.28
CHMP3-202ENST00000393773 A8MVM7 634 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 FTCDNL1E5RQL4 147 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 E9PBE3 544 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 LYNX1G3V0Z9 82 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 RPL36A-HNRNPH2H7BZ11 118 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 ITM2AO43736 263 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 FZD7O75084 574 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF432O94892 652 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 ERCC1P07992 297 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-202ENST00000393773 GKN3PP0CG01 181 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 LYNX1P0DP58 116 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 HOXB1P14653 301 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-202ENST00000393773 IFNGR1P15260 489 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 CBR1P16152 277 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 CREB1P16220 341 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 CDKN2CP42773 168 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 CLNS1AP54105 237 aaKnown RBP13.27□□□□□ -0.29
CHMP3-202ENST00000393773 POU3F1Q03052 451 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-202ENST00000393773 GNA13Q14344 377 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 ADRM1Q16186 407 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 COX20Q5RI15 118 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 C1orf140Q5VVS0 124 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 PRAMEF8Q5VWM4 474 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 PRAMEF7Q5VXH5 474 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 TMEM225Q6GV28 225 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 ZNF440Q8IYI8 595 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 UBASH3BQ8TF42 649 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 CKAP2Q8WWK9 683 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 ANKRD27Q96NW4 1050 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 TAPBPLQ9BX59 468 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 TPK1Q9H3S4 243 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 NOX3Q9HBY0 568 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 DYNLRB1Q9NP97 96 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 RCE1Q9Y256 329 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 RASD1Q9Y272 281 aa13.27□□□□□ -0.29
CHMP3-202ENST00000393773 A0A0A6YYJ9 748 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 TLDC2A0PJX2 215 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 SLCO1B7G3V0H7 640 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 PNMTP11086 282 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 PRG2P13727 222 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 PCMT1P22061 227 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 COMPP49747 757 aaPredicted RBP13.26□□□□□ -0.29
CHMP3-202ENST00000393773 TXNL4AP83876 142 aaKnown RBP13.26□□□□□ -0.29
CHMP3-202ENST00000393773 ARF1P84077 181 aaKnown RBP13.26□□□□□ -0.29
CHMP3-202ENST00000393773 SNTB2Q13425 540 aaKnown RBP13.26□□□□□ -0.29
CHMP3-202ENST00000393773 MSMPQ1L6U9 139 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 LIN52Q52LA3 116 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 WBP2NLQ6ICG8 309 aa13.26□□□□□ -0.29
CHMP3-202ENST00000393773 GLCCI1Q86VQ1 547 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms