RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 MS4A10Q96PG2 267 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 RBM14Q96PK6 669 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 OR8B2Q96RD0 313 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MAP7D2Q96T17 732 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 NDNQ99608 321 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 FERMT1Q9BQL6 677 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CCM2Q9BSQ5 444 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ALKBH7Q9BT30 221 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ADAT1Q9BUB4 502 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CHCHD7Q9BUK0 85 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 UTP14AQ9BVJ6 771 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TRAIPQ9BWF2 469 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SRXN1Q9BYN0 137 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ASPSCR1Q9BZE9 553 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LSG1Q9H089 658 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM222Q9H0R3 208 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 RAB17Q9H0T7 212 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CDH19Q9H159 772 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TRPV6Q9H1D0 765 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ALDH8A1Q9H2A2 487 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 NEUROG2Q9H2A3 272 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MTIF3Q9H2K0 278 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SRMSQ9H3Y6 488 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 KCNK15Q9H427 330 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TSPY26PQ9H489 355 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PLK3Q9H4B4 646 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 UBE2ZQ9H832 354 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SRD5A3Q9H8P0 318 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SIAEQ9HAT2 523 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PALMDQ9NP74 551 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 KCNJ16Q9NPI9 418 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CTPS2Q9NRF8 586 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 AASDHPPTQ9NRN7 309 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM212BQ9NTI7 297 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CWC25Q9NXE8 425 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TMOD3Q9NYL9 352 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 KCND2Q9NZV8 630 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LARSQ9P2J5 1176 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PCSK1NQ9UHG2 260 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CPSF3Q9UKF6 684 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 FBXL3Q9UKT7 428 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 EMCNQ9ULC0 261 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 KIAA1257Q9ULG3 409 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PCDHGB4Q9UN71 923 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CAMK2AQ9UQM7 478 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 STK38LQ9Y2H1 464 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 DHRS7Q9Y394 339 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CMAHPQ9Y471 501 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CSDC2Q9Y534 153 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRC42Q9Y546 428 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PCDHGB6Q9Y5F9 930 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 IKBKGQ9Y6K9 419 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SHROOM4Q9ULL8 1493 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 NCOA6Q14686 2063 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CHD9Q3L8U1 2897 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 USP6P35125 1406 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SSH2Q76I76 1423 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 AHDC1Q5TGY3 1603 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRK1Q38SD2 2015 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CACNA1HO95180 2353 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 C2CD3Q4AC94 2353 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PCNX1Q96RV3 2341 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 KIAA2026Q5HYC2 2103 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 COL4A2P08572 1712 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CCDC168Q8NDH2 2452 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ITIH6Q6UXX5 1313 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 KAT6BQ8WYB5 2073 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GLYATL1P3A0A0U1RQE8 302 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 A0A1B0GU33 70 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 E2F8A0AVK6 867 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ARRDC5A6NEK1 342 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RBFOX3A6NFN3 312 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GLOD5A6NK44 160 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 VSTM2BA6NLU5 285 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 LGALS16A8MUM7 142 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 A8MUN3 132 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 F5H5T6 163 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 H3BNH8 94 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 C19orf84I3L1E1 186 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 K7EIL1 84 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 EI24O14681 340 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TP53I11O14683 189 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 AGPAT2O15120 278 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 KMOO15229 486 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NPHP1O15259 732 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NCK2O43639 380 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TSPAN2O60636 221 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RAMP1O60894 148 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ECI2O75521 394 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PGM3O95394 542 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF682O95780 498 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CFDP00746 253 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OAS1P00973 400 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CALCAP01258 141 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 JCHAINP01591 159 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 IGLV3-25P01717 112 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 KRT8P05787 483 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SNRPAP09012 282 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 STAG3L1P0CL83 205 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CSH1P0DML2 217 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms