RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 PDCD4Q53EL6 469 aaKnown RBP23.08■■□□□ 1.29
NPHP3-202ENST00000383282 LSRQ86X29 649 aaPredicted RBP23.08■■□□□ 1.29
NPHP3-202ENST00000383282 TMEM158Q8WZ71 300 aa23.08■■□□□ 1.29
NPHP3-202ENST00000383282 BOD1Q96IK1 185 aa23.08■■□□□ 1.29
NPHP3-202ENST00000383282 RMND5AQ9H871 391 aa23.08■■□□□ 1.29
NPHP3-202ENST00000383282 TMEM160Q9NX00 188 aa23.08■■□□□ 1.29
NPHP3-202ENST00000383282 THUMPD1Q9NXG2 353 aaKnown RBP23.08■■□□□ 1.29
NPHP3-202ENST00000383282 ZNF232Q9UNY5 417 aa23.08■■□□□ 1.29
NPHP3-202ENST00000383282 ZNF443Q9Y2A4 671 aaPredicted RBP23.08■■□□□ 1.29
NPHP3-202ENST00000383282 FBN3Q75N90 2809 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 A0A096LPI6 279 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 OR6C65A6NJZ3 312 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 ZNF587BE7ETH6 402 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 FRS3O43559 492 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 SNNO75324 88 aaPredicted RBP23.07■■□□□ 1.28
NPHP3-202ENST00000383282 F12P00748 615 aaPredicted RBP23.07■■□□□ 1.28
NPHP3-202ENST00000383282 ETFAP13804 333 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 MAPK11Q15759 364 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 HIKESHIQ53FT3 197 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 RNF220Q5VTB9 566 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 CYB5R2Q6BCY4 276 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 FBXO17Q96EF6 278 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 TPT1P8Q9HAU6 139 aa23.07■■□□□ 1.28
NPHP3-202ENST00000383282 ZCCHC18P0CG32 403 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 USF1P22415 310 aaPredicted RBP23.06■■□□□ 1.28
NPHP3-202ENST00000383282 MVDP53602 400 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 UBE2NP61088 152 aaKnown RBP23.06■■□□□ 1.28
NPHP3-202ENST00000383282 SNRPD2P62316 118 aaKnown RBP23.06■■□□□ 1.28
NPHP3-202ENST00000383282 TBRG1Q3YBR2 411 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 C1orf140Q5VVS0 124 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 PRAMEF8Q5VWM4 474 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 PRAMEF7Q5VXH5 474 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 OR1K1Q8NGR3 316 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 SLC38A2Q96QD8 506 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 BEX2Q9BXY8 128 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 LPAR3Q9UBY5 353 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 RASD1Q9Y272 281 aa23.06■■□□□ 1.28
NPHP3-202ENST00000383282 TFPTP0C1Z6 253 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 PDLIM4P50479 330 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 CREB3L2Q70SY1 520 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 SLC38A5Q8WUX1 472 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 NANOS1Q8WY41 292 aaKnown RBP23.05■■□□□ 1.28
NPHP3-202ENST00000383282 ITCHQ96J02 903 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 MAGEB18Q96M61 343 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 ZNF317Q96PQ6 595 aaPredicted RBP23.05■■□□□ 1.28
NPHP3-202ENST00000383282 SPATA9Q9BWV2 254 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 SLC6A13Q9NSD5 602 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 IFT52Q9Y366 437 aa23.05■■□□□ 1.28
NPHP3-202ENST00000383282 A0A0G2JPF8 293 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 HNRNPCL2B2RXH8 293 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 HNRNPCL3B7ZW38 293 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 HNRNPCL1O60812 293 aaKnown RBP23.04■■□□□ 1.28
NPHP3-202ENST00000383282 AHSA1O95433 338 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 LGI1O95970 557 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 CRYAAP02489 173 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 HNRNPCL4P0DMR1 293 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 GTF2E2P29084 291 aaKnown RBP23.04■■□□□ 1.28
NPHP3-202ENST00000383282 SELENOPP49908 381 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 P2RY4P51582 365 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 LSM11P83369 360 aaKnown RBP eCLIP23.04■■□□□ 1.28
NPHP3-202ENST00000383282 SWI5Q1ZZU3 235 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 NIPAL3Q6P499 406 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 MSANTD1Q6ZTZ1 278 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 CLIP4Q8N3C7 705 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 STK35Q8TDR2 534 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 CKAP2Q8WWK9 683 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 TMEM19Q96HH6 336 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 ALKBH3Q96Q83 286 aaPredicted RBP23.04■■□□□ 1.28
NPHP3-202ENST00000383282 KATNB1Q9BVA0 655 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 MOV10Q9HCE1 1003 aaKnown RBP23.04■■□□□ 1.28
NPHP3-202ENST00000383282 ZIM2Q9NZV7 527 aa23.04■■□□□ 1.28
NPHP3-202ENST00000383282 HEATR1Q9H583 2144 aaKnown RBP23.03■■□□□ 1.28
NPHP3-202ENST00000383282 IGHV1-18A0A0C4DH31 117 aa23.03■■□□□ 1.28
NPHP3-202ENST00000383282 ZNF16P17020 682 aaPredicted RBP23.03■■□□□ 1.28
NPHP3-202ENST00000383282 RPS26P11Q5JNZ5 115 aaPredicted RBP23.03■■□□□ 1.28
NPHP3-202ENST00000383282 PHC2Q8IXK0 858 aa23.03■■□□□ 1.28
NPHP3-202ENST00000383282 C3orf49Q96BT1 292 aa23.03■■□□□ 1.28
NPHP3-202ENST00000383282 MAELQ96JY0 434 aaKnown RBP23.03■■□□□ 1.28
NPHP3-202ENST00000383282 PIMREGQ9BSJ6 248 aa23.03■■□□□ 1.28
NPHP3-202ENST00000383282 SHARPINQ9H0F6 387 aa23.03■■□□□ 1.28
NPHP3-202ENST00000383282 NDUFS8O00217 210 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 NPIPB7O75200 414 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 LY6HO94772 140 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 IGHV4-31P0DP07 118 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 PRG2P13727 222 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 GZMKP49863 264 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 C6orf10Q5SRN2 563 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 SERPINA11Q86U17 422 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 MFSD8Q8NHS3 518 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 MAGEE2Q8TD90 523 aaPredicted RBP23.02■■□□□ 1.28
NPHP3-202ENST00000383282 LINC00470Q9BZP3 86 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 MYOZ1Q9NP98 299 aaPredicted RBP23.02■■□□□ 1.28
NPHP3-202ENST00000383282 CA10Q9NS85 328 aa23.02■■□□□ 1.28
NPHP3-202ENST00000383282 ARPC4-TTLL3A0A0A6YYG9 625 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 TMEM229AB2RXF0 380 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 SERPINF1P36955 418 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 MST1LQ2TV78 715 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 GTDC1Q4AE62 458 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 ZNF311Q5JNZ3 666 aa23.01■■□□□ 1.27
NPHP3-202ENST00000383282 SLC46A3Q7Z3Q1 461 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms