RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 DEPDC4Q8N2C3 294 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 C10orf111Q8N326 155 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 C1orf162Q8NEQ5 155 aaPredicted RBP12.37□□□□□ -0.43
SHOX-202ENST00000381575 FBXO17Q96EF6 278 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 RHNO1Q9BSD3 238 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 SF3B5Q9BWJ5 86 aaKnown RBP12.37□□□□□ -0.43
SHOX-202ENST00000381575 CACYBPQ9HB71 228 aaKnown RBP12.37□□□□□ -0.43
SHOX-202ENST00000381575 SLAMF8Q9P0V8 285 aa12.37□□□□□ -0.43
SHOX-202ENST00000381575 A0A096LPE4 126 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 A0A0G2JPF8 293 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 A0A1W2PPZ6 126 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 TMEM247A6NEH6 219 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 HNRNPCL3B7ZW38 293 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 HNRNPCL1O60812 293 aaKnown RBP12.36□□□□□ -0.43
SHOX-202ENST00000381575 NPIPB7O75200 414 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 UPK3AO75631 287 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 HNRNPCL4P0DMR1 293 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 HOXB9P17482 250 aaPredicted RBP12.36□□□□□ -0.43
SHOX-202ENST00000381575 CBLP22681 906 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 MAP2K6P52564 334 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 SLC18A1P54219 525 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 PRPS1P60891 318 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 EGR4Q05215 589 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 RAB35Q15286 201 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 EPGNQ6UW88 154 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 CREB3L2Q70SY1 520 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 EPHX4Q8IUS5 362 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 MSRB3Q8IXL7 192 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 C17orf78Q8N4C9 275 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 POMGNT2Q8NAT1 580 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 NFKBIDQ8NI38 313 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 KTI12Q96EK9 354 aaPredicted RBP12.36□□□□□ -0.43
SHOX-202ENST00000381575 EBF4Q9BQW3 602 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 PTDSS2Q9BVG9 487 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 PRR14Q9BWN1 585 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 SEC61A2Q9H9S3 476 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 FKRPQ9H9S5 495 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 SLCO1B3Q9NPD5 702 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 SLC25A37Q9NYZ2 338 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 ZNF232Q9UNY5 417 aa12.36□□□□□ -0.43
SHOX-202ENST00000381575 IGHV1-18A0A0C4DH31 117 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 ZNF587BE7ETH6 402 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 AHSA1O95433 338 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 PNMTP11086 282 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 TBRG1Q3YBR2 411 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 BEND6Q5SZJ8 279 aaPredicted RBP12.35□□□□□ -0.43
SHOX-202ENST00000381575 ZNF544Q6NX49 715 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 OR10H5Q8NGA6 315 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 OR1K1Q8NGR3 316 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 NANOS1Q8WY41 292 aaKnown RBP12.35□□□□□ -0.43
SHOX-202ENST00000381575 A4GALTQ9NPC4 353 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 IFT52Q9Y366 437 aa12.35□□□□□ -0.43
SHOX-202ENST00000381575 A0A096LPI6 279 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 ELOA3DA6NLF2 546 aaPredicted RBP12.34□□□□□ -0.43
SHOX-202ENST00000381575 C5orf58C9J3I9 102 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 FTCDNL1E5RQL4 147 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 POLR3GO15318 223 aaPredicted RBP12.34□□□□□ -0.43
SHOX-202ENST00000381575 WNT11O96014 354 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 HTR2AP28223 471 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 CLDN17P56750 224 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 STX1BP61266 288 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 TMEM249Q2WGJ8 235 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 ELOA3BQ3SY89 546 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 PAGE3Q5JUK9 113 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 MYPOPQ86VE0 399 aaPredicted RBP12.34□□□□□ -0.43
SHOX-202ENST00000381575 FUNDC1Q8IVP5 155 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 GOLGA6L1Q8N7Z2 621 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 ELOA3Q8NG57 546 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 BBS10Q8TAM1 723 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 STK35Q8TDR2 534 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 IKZF5Q9H5V7 419 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 TCF7L2Q9NQB0 619 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 TMEM45AQ9NWC5 275 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 CCDC167Q9P0B6 97 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 RPS6KB2Q9UBS0 482 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
SHOX-202ENST00000381575 A0A1B0GWA3 101 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 H7C417 338 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 M0R082 166 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 TLX2O43763 284 aaPredicted RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 TPST1O60507 370 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 ERLIN1O75477 346 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 SEC14L2O76054 403 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 CELA3BP08861 270 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 ARAFP10398 606 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 BMP2P12643 396 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 GTF2E2P29084 291 aaKnown RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 APOBEC3AP31941 199 aaPredicted RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 IDH3AP50213 366 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 IL1RL1Q01638 556 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 ROR2Q01974 943 aaKnown RBP12.33□□□□□ -0.44
SHOX-202ENST00000381575 FADDQ13158 208 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 C6orf52Q5T4I8 152 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 GCNT6Q5T4J0 391 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 HMBOX1Q6NT76 420 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
SHOX-202ENST00000381575 CXXC5Q7LFL8 322 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms