RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PVALBP20472 110 aaPredicted RBP11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 HTR1FP30939 366 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 FXYD6P3P58550 94 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 SHC2P98077 582 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 EFNB1P98172 346 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 OAFQ86UD1 273 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 LRRC28Q86X40 367 aaPredicted RBP11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 LINC00615Q96LM1 132 aaPredicted RBP11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 TEAD3Q99594 435 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 NDC1Q9BTX1 674 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 ACTR6Q9GZN1 396 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 PCBD2Q9H0N5 130 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 TRIM36Q9NQ86 728 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 MED9Q9NWA0 146 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 PIPOXQ9P0Z9 390 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 ZNF69Q9UC07 566 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 NDRG3Q9UGV2 375 aa11.48□□□□□ -0.57
PRPF40B-202ENST00000380281 S100A11P31949 105 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 FOXK2Q01167 660 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 DPTQ07507 201 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 ZNF528Q3MIS6 628 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 MFSD12Q6NUT3 480 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 MBOAT2Q6ZWT7 520 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 RAB11FIP2Q7L804 512 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 POGLUT1Q8NBL1 392 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 THAP4Q8WY91 577 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 SMPDL3BQ92485 455 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 TSSK2Q96PF2 358 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 RPP25Q9BUL9 199 aaKnown RBP11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 SRMSQ9H3Y6 488 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 OBSL1O75147 1896 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 MPDZO75970 2070 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 MEIS3P1A6NDR6 274 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 FAM86C2PA6NEL3 165 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 SULT1B1O43704 296 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 TGM6O95932 706 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 C4BPBP20851 252 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 VEGFBP49765 207 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 FZD5Q13467 585 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 RUNX2Q13950 521 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 KCNAB1Q14722 419 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 CD200R1LQ6Q8B3 271 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 MEPCEQ7L2J0 689 aaKnown RBP11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 MCATQ8IVS2 390 aaKnown RBP11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 CDK20Q8IZL9 346 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 LRRC25Q8N386 305 aaPredicted RBP11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 TMIEQ8NEW7 156 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 SNX33Q8WV41 574 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 FGF11Q92914 225 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 SDF2Q99470 211 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 FAM83CQ9BQN1 747 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 ASXL3Q9C0F0 2248 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 ZNF106Q9H2Y7 1883 aaKnown RBP11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 BCL2L10Q9HD36 194 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 KCNE5Q9UJ90 142 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 GTF2A1LQ9UNN4 478 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 MPTX1A8MV57 137 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 NFATC1O95644 943 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 TYRP1P17643 537 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 FPR3P25089 353 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 CMPK1P30085 196 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 FRKP42685 505 aaPredicted RBP11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 RAD52P43351 418 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 PGDP52209 483 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 UBE2MP61081 183 aaKnown RBP11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 RPE65Q16518 533 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 TMEM255AQ5JRV8 349 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 LRRN1Q6UXK5 716 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 TMUB2Q71RG4 321 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 BTN2A1Q7KYR7 527 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 NRROSQ86YC3 692 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 TMEM52Q8NDY8 209 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 OR4K14Q8NGD5 310 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 COX14Q96I36 57 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 C10orf90Q96M02 699 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 HS6ST2Q96MM7 605 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 PRDM9Q9NQV7 894 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 CLDND1Q9NY35 253 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 NPTNQ9Y639 398 aa11.47□□□□□ -0.57
PRPF40B-202ENST00000380281 RIIAD1A6NNX1 92 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 CTSVO60911 334 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 CTSBP07858 339 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 GABRA1P14867 456 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 IL9P15248 144 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 ATF1P18846 271 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 MST1P26927 711 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 STAT5AP42229 794 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 GK2Q14410 553 aaPredicted RBP11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 NIPAL3Q6P499 406 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 VN1R4Q7Z5H5 301 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 ETFBKMTQ8IXQ9 262 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 C12orf45Q8N5I9 185 aaPredicted RBP11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 ZNF485Q8NCK3 441 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 OR56B4Q8NH76 319 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 SLC25A28Q96A46 364 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 EXOSC3Q9NQT5 275 aaKnown RBP11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 OR10H1Q9Y4A9 318 aa11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 KIF26AQ9ULI4 1882 aaPredicted RBP11.46□□□□□ -0.57
PRPF40B-202ENST00000380281 A0A1B0GTH9 108 aa11.46□□□□□ -0.58
PRPF40B-202ENST00000380281 PQLC2LA1A4F0 135 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms