RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 COPZ1P61923 177 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 GRM7Q14831 915 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 OR52L1Q8NGH7 329 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 OR4K13Q8NH42 304 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF486Q96H40 463 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 DOK1Q99704 481 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 NXF5Q9H1B4 397 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 GPN2Q9H9Y4 310 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 NUDT15Q9NV35 164 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 SIDT1Q9NXL6 827 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 ADAM18Q9Y3Q7 739 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 DUX1O43812 170 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 SRPX2O60687 465 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CTNSO60931 367 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 HTR3BO95264 441 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 PAICSP22234 425 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 SPCS3P61009 180 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 C1DQ13901 141 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 TBCEQ15813 527 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 FHL5Q5TD97 284 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 FDX2Q6P4F2 183 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 OGFOD3Q6PK18 319 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 PLEKHG7Q6ZR37 379 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 OR52I1Q8NGK6 324 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF563Q8TA94 476 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 NUAK2Q9H093 628 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 RANBP3Q9H6Z4 567 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 DAPK2Q9UIK4 370 aa9.92□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF346Q9UL40 294 aaKnown RBP9.92□□□□□ -0.82
NEDD9-201ENST00000379433 A0A1B0GV90 55 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 A0A1B0GVC2 190 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 CTDSP2O14595 271 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 SLC22A1O15245 554 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 ASNA1O43681 348 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 CDC40O60508 579 aaKnown RBP eCLIP9.91□□□□□ -0.82
NEDD9-201ENST00000379433 IGLV3-19P01714 112 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 OR3A3P47888 321 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 TSPAN31Q12999 210 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 ANGPT1Q15389 498 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 PRTGQ2VWP7 1150 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 TRIM16LQ309B1 348 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 TM4SF20Q53R12 229 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 HEPHL1Q6MZM0 1159 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 PRR18Q8N4B5 295 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 FAM98AQ8NCA5 519 aaKnown RBP9.91□□□□□ -0.82
NEDD9-201ENST00000379433 SDR9C7Q8NEX9 313 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 OR2T33Q8NG76 320 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 C8orf44Q96CB5 159 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 TRMT61AQ96FX7 289 aaKnown RBP9.91□□□□□ -0.82
NEDD9-201ENST00000379433 ARHGDIGQ99819 225 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 UBQLN3Q9H347 655 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 HINT3Q9NQE9 182 aaKnown RBP9.91□□□□□ -0.82
NEDD9-201ENST00000379433 CBLCQ9ULV8 474 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 MED31Q9Y3C7 131 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 FRYQ5TBA9 3013 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 PCNX3Q9H6A9 2034 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 LAMA5O15230 3695 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 PLD2O14939 933 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 DPM1O60762 260 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 GPX5O75715 221 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 BMP4P12644 408 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 NAA10P41227 235 aaPredicted RBP9.91□□□□□ -0.82
NEDD9-201ENST00000379433 NR4A2P43354 598 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 HSD11B2P80365 405 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 CEBPEQ15744 281 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 SSX1Q16384 188 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 EIPR1Q53HC9 387 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 LYSMD4Q5XG99 296 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 HLA-DQA1Q5Y7H0 255 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 LYPD4Q6UWN0 246 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 BMP8AQ7Z5Y6 402 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 GUCD1Q96NT3 240 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 DUSP22Q9NRW4 184 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 WNT16Q9UBV4 365 aa9.91□□□□□ -0.82
NEDD9-201ENST00000379433 TRBV23-1A0A0A0MS06 115 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 C2orf92A0A1B0GVN3 265 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 FAM172BPA6NC97 362 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 UNC119BA6NIH7 251 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 A6NLC8 198 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF879B4DU55 563 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 HCRTR2O43614 444 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 MPZL2O60487 215 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 NGFRP08138 427 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 CT45A8P0DMV1 189 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 CT45A9P0DMV2 189 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 TUBG1P23258 451 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 HTD2P86397 168 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 CT45A2Q5DJT8 189 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 PDSS1Q5T2R2 415 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 KIRREL2Q6UWL6 708 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 MBOAT2Q6ZWT7 520 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 BCORP1Q8N888 145 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 OR6K6Q8NGW6 343 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 ZNF764Q96H86 408 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-201ENST00000379433 OR6C1Q96RD1 312 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 AKIRIN1Q9H9L7 192 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-201ENST00000379433 APMAPQ9HDC9 416 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 ABCB9Q9NP78 766 aa9.9□□□□□ -0.82
NEDD9-201ENST00000379433 MEPEQ9NQ76 525 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms