RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 A8MXE2 369 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 MSTNO14793 375 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 VAMP5O95183 116 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 FABP3P05413 133 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 GRPRP30550 384 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 MAGEA2P43356 314 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 SIRPAP78324 504 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 DGCR6Q14129 220 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 ZNF74Q16587 644 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 TMEM201Q5SNT2 666 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 H1FNTQ75WM6 255 aaPredicted RBP16.67■□□□□ 0.26
SSU72-203ENST00000378725 ZDHHC21Q8IVQ6 265 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 RNF113BQ8IZP6 322 aaKnown RBP16.67■□□□□ 0.26
SSU72-203ENST00000378725 SCAIQ8N9R8 606 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 ADPRHL1Q8NDY3 354 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 ZNF347Q96SE7 839 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 SEPHS2Q99611 448 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 KLHL4Q9C0H6 718 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 MRPL39Q9NYK5 338 aaKnown RBP16.67■□□□□ 0.26
SSU72-203ENST00000378725 RASD1Q9Y272 281 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 MED31Q9Y3C7 131 aa16.67■□□□□ 0.26
SSU72-203ENST00000378725 USP9XQ93008 2570 aaPredicted RBP16.67■□□□□ 0.26
SSU72-203ENST00000378725 DOCK7Q96N67 2140 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 LOC102725191A0A1B0GVB3 256 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 LRRN3E7EW58 273 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 M0R082 166 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 GPR171O14626 319 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 DIRAS1O95057 198 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 CH25HO95992 272 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 H1F0P07305 194 aaKnown RBP16.66■□□□□ 0.26
SSU72-203ENST00000378725 UMPSP11172 480 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 ASCL1P50553 236 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 FLOT2Q14254 428 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 FAM98BQ52LJ0 330 aaKnown RBP16.66■□□□□ 0.26
SSU72-203ENST00000378725 TMEM225Q6GV28 225 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 MAMDC2Q7Z304 686 aaPredicted RBP16.66■□□□□ 0.26
SSU72-203ENST00000378725 NUFIP2Q7Z417 695 aaKnown RBP16.66■□□□□ 0.26
SSU72-203ENST00000378725 PFN4Q8NHR9 129 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 ZNF417Q8TAU3 575 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 LIPHQ8WWY8 451 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 ACOT11Q8WXI4 607 aaPredicted RBP16.66■□□□□ 0.26
SSU72-203ENST00000378725 ZNF587Q96SQ5 575 aaPredicted RBP16.66■□□□□ 0.26
SSU72-203ENST00000378725 FUZQ9BT04 418 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 FKRPQ9H9S5 495 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 CHST11Q9NPF2 352 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 EMC3Q9P0I2 261 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 SEC14L4Q9UDX3 406 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 PROCRQ9UNN8 238 aa16.66■□□□□ 0.26
SSU72-203ENST00000378725 A0A087WUU8 490 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 MS4A18H0YCH9 400 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 KPNA4O00629 521 aaPredicted RBP16.65■□□□□ 0.26
SSU72-203ENST00000378725 ASAH2BP0C7U1 165 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 CBLP22681 906 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 GTF2E2P29084 291 aaKnown RBP16.65■□□□□ 0.26
SSU72-203ENST00000378725 NTF4P34130 210 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 SMIM11AP58511 58 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 CHRNB3Q05901 458 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 FOXD4Q12950 439 aaPredicted RBP16.65■□□□□ 0.26
SSU72-203ENST00000378725 POU4F3Q15319 338 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 MS4A18Q3C1V0 323 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 MBOAT2Q6ZWT7 520 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 SLC46A3Q7Z3Q1 461 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 ADGRG5Q8IZF4 528 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 C10orf53Q8N6V4 93 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 ZIC4Q8N9L1 334 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 ZNF610Q8N9Z0 462 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 SLC7A13Q8TCU3 470 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 ZNF775Q96BV0 537 aaPredicted RBP16.65■□□□□ 0.26
SSU72-203ENST00000378725 ASPNQ9BXN1 380 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 NANSQ9NR45 359 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 C20orf141Q9NUB4 165 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 ZNF229Q9UJW7 825 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 FLVCR1Q9Y5Y0 555 aa16.65■□□□□ 0.26
SSU72-203ENST00000378725 TCRBV3S1A0A5B6 114 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 A1L4Q6 167 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 ENO4A6NNW6 628 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 EEF1E1-BLOC1S5C9J1V9 151 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 PLPP3O14495 311 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 EEF1E1O43324 174 aaKnown RBP16.64■□□□□ 0.25
SSU72-203ENST00000378725 RAP2AP10114 183 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 HOXB6P17509 224 aaKnown RBP16.64■□□□□ 0.25
SSU72-203ENST00000378725 PCYT1AP49585 367 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 LSM11P83369 360 aaKnown RBP eCLIP16.64■□□□□ 0.25
SSU72-203ENST00000378725 PRKCDQ05655 676 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 PODNL1Q6PEZ8 512 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 ZNF474Q6S9Z5 364 aaPredicted RBP16.64■□□□□ 0.25
SSU72-203ENST00000378725 TBPL2Q6SJ96 375 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 YTHDF3Q7Z739 585 aaKnown RBP16.64■□□□□ 0.25
SSU72-203ENST00000378725 GALNT5Q7Z7M9 940 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 OR9K2Q8NGE7 335 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 OR5J2Q8NH18 312 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 CANT1Q8WVQ1 401 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 UTP4Q969X6 686 aaKnown RBP16.64■□□□□ 0.25
SSU72-203ENST00000378725 SGTBQ96EQ0 304 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 OXGR1Q96P68 337 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 OPN3Q9H1Y3 402 aaPredicted RBP16.64■□□□□ 0.25
SSU72-203ENST00000378725 FANCFQ9NPI8 374 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 B3GAT1Q9P2W7 334 aa16.64■□□□□ 0.25
SSU72-203ENST00000378725 FOXD3Q9UJU5 478 aaPredicted RBP16.64■□□□□ 0.25
SSU72-203ENST00000378725 MED12LQ86YW9 2145 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms