RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 SAC3D1A6NKF1 404 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 H0YJX3 145 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 C16orf97H3BN30 126 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 LINC01387J3KSC0 135 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 EIF1AYO14602 144 aaKnown RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 FFAR1O14842 300 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 SMAD7O15105 426 aaKnown RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 E2F6O75461 281 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 CSTAP01040 98 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF23P17027 643 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF26P17031 533 aaPredicted RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 IFNA8P32881 189 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 UGT2B10P36537 528 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 EIF1AXP47813 144 aaKnown RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ARHGDIAP52565 204 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 SUCLG1P53597 346 aaKnown RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 CLDN15P56746 228 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ANKRD34AQ69YU3 496 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF474Q6S9Z5 364 aaPredicted RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ZBTB49Q6ZSB9 765 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 MISPQ8IVT2 679 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 CNOT9Q92600 299 aaKnown RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 CIB1Q99828 191 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 GABARAPL1Q9H0R8 117 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ANKRD19PQ9H560 264 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 HHATLQ9HCP6 504 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ACER3Q9NUN7 267 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ELOVL5Q9NYP7 299 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 EMC9Q9Y3B6 208 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF175Q9Y473 711 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 HEATR5AQ86XA9 2040 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 G3V2T6 193 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 J3KTA2 159 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 FRS3O43559 492 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 TPST2O60704 377 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 OR5F1O95221 314 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ANGPTL1O95841 491 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 THRBP10828 461 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 CCKARP32238 428 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 KIR2DL2P43627 348 aaPredicted RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 LIMS1P48059 325 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 CTBP2P56545 445 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 SPIBQ01892 262 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 APOOLQ6UXV4 268 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 ZNF610Q8N9Z0 462 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 GATSQ8NAP1 163 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 TOR1AIP2Q8NFQ8 470 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 OR4C15Q8NGM1 316 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 MCHR1Q99705 422 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 PSD2Q9BQI7 771 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 RTN4RQ9BZR6 473 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 COQ10BQ9H8M1 238 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 RNF122Q9H9V4 155 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 NMNAT1Q9HAN9 279 aaPredicted RBP12.28□□□□□ -0.44
PRPF18-202ENST00000378572 CLEC4AQ9UMR7 237 aa12.28□□□□□ -0.44
PRPF18-202ENST00000378572 A0A1W2PRQ8 180 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 ARRDC5A6NEK1 342 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 FAM171A2A8MVW0 826 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 DEFB108AA8MXU0 73 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 H7C1Q1 480 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 TNFRSF11BO00300 401 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 ZNF264O43296 627 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 EIF4E2O60573 245 aaKnown RBP12.27□□□□□ -0.45
PRPF18-202ENST00000378572 BCAS1O75363 584 aaPredicted RBP12.27□□□□□ -0.45
PRPF18-202ENST00000378572 GADD45GO95257 159 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 HPRP00739 348 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 H1F0P07305 194 aaKnown RBP12.27□□□□□ -0.45
PRPF18-202ENST00000378572 UBL4AP11441 157 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 CRYGSP22914 178 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 YAP1P46937 504 aaKnown RBP12.27□□□□□ -0.45
PRPF18-202ENST00000378572 CDH12P55289 794 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 C17orf67Q0P5P2 114 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 DGCR6Q14129 220 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 CD226Q15762 336 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 ACKR1Q16570 336 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 LRRC36Q1X8D7 754 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 ALKBH2Q6NS38 261 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 TMEM179BQ7Z7N9 219 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 CXorf67Q86X51 503 aaPredicted RBP12.27□□□□□ -0.45
PRPF18-202ENST00000378572 LSMEM1Q8N8F7 131 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 PHOSPHO1Q8TCT1 267 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 Q96MF0 132 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 TRIM2Q9C040 744 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 LAT2Q9GZY6 243 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 USE1Q9NZ43 259 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 AP4B1Q9Y6B7 739 aa12.27□□□□□ -0.45
PRPF18-202ENST00000378572 FAAHO00519 579 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 SIAH2O43255 324 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 NDUFB5O43674 189 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 SYNGR4O95473 234 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 OPN1LWP04000 364 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 CD8BP10966 210 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 ACAA2P42765 397 aaKnown RBP12.26□□□□□ -0.45
PRPF18-202ENST00000378572 ZNF41P51814 821 aaPredicted RBP12.26□□□□□ -0.45
PRPF18-202ENST00000378572 TAS2R41P59536 307 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 ST3GAL3Q11203 375 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 EPS8Q12929 822 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 SKP2Q13309 424 aa12.26□□□□□ -0.45
PRPF18-202ENST00000378572 PIN1Q13526 163 aaPredicted RBP12.26□□□□□ -0.45
PRPF18-202ENST00000378572 ENTPD8Q5MY95 495 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms