RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CDH10Q9Y6N8 788 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 USP9YO00507 2555 aaPredicted RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ZZEF1O43149 2961 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 FASNP49327 2511 aaKnown RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 MPZL2O60487 215 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 LALBAP00709 142 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 HBQ1P09105 142 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 IL11P20809 199 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ABCD3P28288 659 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 MPLP40238 635 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 SNRPD2P62316 118 aaKnown RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 TSPAN31Q12999 210 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 KEAP1Q14145 624 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 PRTGQ2VWP7 1150 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 SCGB2B2Q4G0G5 96 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 BTN2A1Q7KYR7 527 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 RAB11FIP2Q7L804 512 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF101Q8IZC7 436 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ESX1Q8N693 406 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 GHSRQ92847 366 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 KCNK15Q9H427 330 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 RASD1Q9Y272 281 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 POLQO75417 2590 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 DMXL1Q9Y485 3027 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 A0A087WV48 116 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 A0A1W2PQM1 296 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 A0A1W2PR80 420 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 SLC16A6O15403 523 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 KCNJ13O60928 360 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 LDOC1O95751 146 aaPredicted RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ALDH3B2P48448 385 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 GBX2P52951 348 aaPredicted RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 PCBP3P57721 371 aaKnown RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 UBE2IP63279 158 aaKnown RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 RHAGQ02094 409 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ACY1Q03154 408 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 DMPKQ09013 629 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 LAIR2Q6ISS4 152 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 FOXRED2Q8IWF2 684 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF595Q8IYB9 648 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 OR5J2Q8NH18 312 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 MOAP1Q96BY2 351 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 CCNL2Q96S94 520 aaPredicted RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 SLC30A2Q9BRI3 323 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 RSPO3Q9BXY4 272 aaPredicted RBP7.41□□□□□ -1.22
CKAP2-203ENST00000378037 EMC7Q9NPA0 242 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 SDHAF3Q9NRP4 125 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 NPFFR2Q9Y5X5 522 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 FKBP7Q9Y680 259 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 KIAA1549LQ6ZVL6 1849 aa7.41□□□□□ -1.22
CKAP2-203ENST00000378037 CCDC182A6NF36 153 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 VSTM2BA6NLU5 285 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 SSNA1O43805 119 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 NSA2O95478 260 aaKnown RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 MT-ND5P03915 603 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 GLI4P10075 376 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 MAP3K8P41279 467 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 OMPP47874 163 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 GDI2P50395 445 aaKnown RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 CCL11P51671 97 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 KRR1Q13601 381 aaKnown RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 ATXN7L3Q14CW9 347 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 LRRC37A5PQ49AS3 106 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 CCBE1Q6UXH8 406 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 NATD1Q8N6N6 113 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 CELF2-AS1Q8N7Q2 184 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 PLPP7Q8NBV4 271 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 OR5W2Q8NH69 310 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 NEK7Q8TDX7 302 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 THAP4Q8WY91 577 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 MUL1Q969V5 352 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 NPAS1Q99742 590 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 MFRPQ9BY79 579 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 TP63Q9H3D4 680 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 MEPEQ9NQ76 525 aaPredicted RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 C8orf4Q9NR00 106 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 SLC22A13Q9Y226 551 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 CFL2Q9Y281 166 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 SULT2B1O00204 365 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 IFNGR1P15260 489 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 PGCP20142 388 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 PRPH2P23942 346 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 HSD11B1P28845 292 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 TNFSF8P32971 234 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 SRP9P49458 86 aaKnown RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 CCR5P51681 352 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 MRPL28Q13084 256 aaKnown RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 SERTAD2Q14140 314 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 ACSM3Q53FZ2 586 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF628Q5EBL2 1059 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF620Q6ZNG0 422 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 MBOAT2Q6ZWT7 520 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 TEX19Q8NA77 164 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 GOLM1Q8NBJ4 401 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 DEFB124Q8NES8 71 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 TMEM163Q8TC26 289 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 TRMT61AQ96FX7 289 aaKnown RBP7.4□□□□□ -1.22
CKAP2-203ENST00000378037 WNT16Q9UBV4 365 aa7.4□□□□□ -1.22
CKAP2-203ENST00000378037 C2orf16Q68DN1 1984 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms