RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SHEQ5VZ18 495 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 REP15Q6BDI9 236 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 SEZ6L2Q6UXD5 910 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 P3H2Q8IVL5 708 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 ZNF611Q8N823 705 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 SMYD1Q8NB12 490 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 C1orf162Q8NEQ5 155 aaPredicted RBP14.82□□□□□ -0.04
HMGN4-201ENST00000377575 OR8J3Q8NGG0 315 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 RNF217Q8TC41 542 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 TMEM171Q8WVE6 324 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 RASSF5Q8WWW0 418 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 AKAP1Q92667 903 aaKnown RBP eCLIP14.82□□□□□ -0.04
HMGN4-201ENST00000377575 SLC25A36Q96CQ1 311 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 KTI12Q96EK9 354 aaPredicted RBP14.82□□□□□ -0.04
HMGN4-201ENST00000377575 ZNF385AQ96PM9 386 aaKnown RBP14.82□□□□□ -0.04
HMGN4-201ENST00000377575 EPYCQ99645 322 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 CXorf56Q9H5V9 222 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 CAPN7Q9Y6W3 813 aa14.82□□□□□ -0.04
HMGN4-201ENST00000377575 TRAV36DV7A0A075B6V5 113 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 OR6C65A6NJZ3 312 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 PDLIM1O00151 329 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 AIM2O14862 343 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 SLC22A2O15244 555 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 FMO6PO60774 539 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 FZD7O75084 574 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 OPN1SWP03999 348 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 MDH1P40925 334 aaKnown RBP14.81□□□□□ -0.04
HMGN4-201ENST00000377575 SF3A3Q12874 501 aaKnown RBP eCLIP14.81□□□□□ -0.04
HMGN4-201ENST00000377575 FOXD4Q12950 439 aaPredicted RBP14.81□□□□□ -0.04
HMGN4-201ENST00000377575 MFSD13AQ14CX5 517 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 OR1Q1Q15612 314 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 TSPO2Q5TGU0 170 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 NANOGP8Q6NSW7 305 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 ADAM5Q6NVV9 412 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 KLHL17Q6TDP4 642 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 SNX32Q86XE0 403 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 C17orf78Q8N4C9 275 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 ZIC4Q8N9L1 334 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 PCYOX1LQ8NBM8 494 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 SLC26A7Q8TE54 656 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 FBXW5Q969U6 566 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 LRRC58Q96CX6 371 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 ARHGDIGQ99819 225 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 ECSITQ9BQ95 431 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 NANOGQ9H9S0 305 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 SLC7A10Q9NS82 523 aa14.81□□□□□ -0.04
HMGN4-201ENST00000377575 A0A087WUJ7 227 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 M0QX08 132 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 M0R3H8 397 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 ATP8B1O43520 1251 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 KRT33AO76009 404 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 LGI1O95970 557 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 MPGP29372 298 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 GABRA6Q16445 453 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 NRF1Q16656 503 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 VMACQ2NL98 169 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 Q5PR19 223 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 C1QTNF12Q5T7M4 302 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 ZNF613Q6PF04 617 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 CREB3L2Q70SY1 520 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 WFDC11Q8NEX6 87 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 OR6S1Q8NH40 331 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 OR52N5Q8NH56 324 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 PRR14Q9BWN1 585 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 AMBRA1Q9C0C7 1298 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 GID8Q9NWU2 228 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 METRNQ9UJH8 293 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 B3GALT5Q9Y2C3 310 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 AMDHD2Q9Y303 409 aa14.8□□□□□ -0.04
HMGN4-201ENST00000377575 IGKV1D-42A0A075B6H8 117 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 DPRXA6NFQ7 191 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 ZNF587BE7ETH6 402 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 M0R082 166 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 FXYD1O00168 92 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 AKAP8O43823 692 aaKnown RBP14.79□□□□□ -0.04
HMGN4-201ENST00000377575 ZNF43P17038 809 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 CADP27708 2225 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 DUSP7Q16829 419 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 ZNF672Q499Z4 452 aaPredicted RBP14.79□□□□□ -0.04
HMGN4-201ENST00000377575 RABL3Q5HYI8 236 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 C9orf135Q5VTT2 229 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 NIPAL3Q6P499 406 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 ERICH5Q6P6B1 374 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 KLHL24Q6TFL4 600 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 TMEM108Q6UXF1 575 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 ADPRHL1Q8NDY3 354 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 KBTBD8Q8NFY9 601 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 ZNF417Q8TAU3 575 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 C10orf82Q8WW14 230 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 TAAR8Q969N4 342 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 TAMM41Q96BW9 452 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 PERPQ96FX8 193 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 MUS81Q96NY9 551 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 ZNF587Q96SQ5 575 aaPredicted RBP14.79□□□□□ -0.04
HMGN4-201ENST00000377575 MCHR1Q99705 422 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 TMEM43Q9BTV4 400 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 GSX2Q9BZM3 304 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 NPAP1Q9NZP6 1156 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 MGAT4BQ9UQ53 548 aa14.79□□□□□ -0.04
HMGN4-201ENST00000377575 RCE1Q9Y256 329 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms