RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TMEM255BQ8WV15 326 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 CEBPZOSA8MTT3 80 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 DEFB109BQ30KR1 87 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 AGAP7PQ5VUJ5 663 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 AGAP6Q5VW22 663 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 GDPGP1Q6ZNW5 385 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 LSMEM2Q8N112 164 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 AGAP4Q96P64 663 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 NMNAT3Q96T66 252 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 PBDC1Q9BVG4 233 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 A4GALTQ9NPC4 353 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
GPC6-201ENST00000377047 TCRBV3S1A0A5B6 114 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 LRIT2A6NDA9 550 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 IFNA17P01571 189 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 IGHV3-9P01782 118 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 PRKACBP22694 351 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 TSFMP43897 325 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 MFAP5Q13361 173 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 SF3A2Q15428 464 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 CNOT2Q9NZN8 540 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 NHSL1Q5SYE7 1610 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 CRHBPP24387 322 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 FOXC1Q12948 553 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 ANKRD13BQ86YJ7 626 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 OR1N1Q8NGS0 311 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 CHTF18Q8WVB6 975 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 ELP4Q96EB1 424 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 EHFQ9NZC4 300 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 MOKQ9UQ07 419 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 CACNA1SQ13698 1873 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 F5H5P2 479 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 CYCSP99999 105 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 MRPL58Q14197 206 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 GPR176Q14439 515 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 TBC1D28Q2M2D7 210 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 MFSD12Q6NUT3 480 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 YRDCQ86U90 279 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 FNDC9Q8TBE3 224 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 NEURL3Q96EH8 262 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 TMEM246Q9BRR3 403 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 BET1O15155 118 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 T-ENOLP0DO92 83 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 RAB4BP61018 213 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 RPS18P62269 152 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 MEF2DQ14814 521 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 ELAVL1Q15717 326 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 OLIG3Q7RTU3 272 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 GPR155Q7Z3F1 870 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 ZFP90Q8TF47 636 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 ZNF286AQ9HBT8 521 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 GCM1Q9NP62 436 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 PLPP1O14494 284 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 PRAMEF4O60810 478 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 MSL3P1P0C860 447 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 LCN10Q6JVE6 187 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 CGB2Q6NT52 195 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 RPL22L1Q6P5R6 122 aaKnown RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 Q6ZPB1 254 aaPredicted RBP12.6□□□□□ -0.39
GPC6-201ENST00000377047 CCL4L1Q8NHW4 92 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 FAM210AQ96ND0 272 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 PRRT1Q99946 306 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 ZNF355PQ9NSJ1 428 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 ASB4Q9Y574 426 aa12.6□□□□□ -0.39
GPC6-201ENST00000377047 TARM1B6A8C7 271 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 PLRG1O43660 514 aaKnown RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 GAB1Q13480 694 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 IL10RAQ13651 578 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 YOD1Q5VVQ6 348 aaPredicted RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 OR4N2Q8NGD1 307 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 OR6F1Q8NGZ6 308 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 THAP7Q9BT49 309 aaPredicted RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 UBFD1O14562 309 aaKnown RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 PRRG2O14669 202 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 BCAS1O75363 584 aaPredicted RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 TPPPO94811 219 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 GLULP15104 373 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 PRKAR1BP31321 381 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 CCR2P41597 374 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 KANSL1Q7Z3B3 1105 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 FNDC8Q8TC99 324 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 GGHQ92820 318 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 APH1AQ96BI3 265 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 ZDHHC5Q9C0B5 715 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 C20orf27Q9GZN8 174 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 SLC5A10A0PJK1 596 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 MCRIP1C9JLW8 97 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 ARPC1BO15143 372 aaKnown RBP12.59□□□□□ -0.39
GPC6-201ENST00000377047 NCR1O76036 304 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 GIPRP48546 466 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 DPTQ07507 201 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 VWA2Q5GFL6 755 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 B3GLCTQ6Y288 498 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 GDF7Q7Z4P5 450 aa12.59□□□□□ -0.39
GPC6-201ENST00000377047 SPEM1Q8N4L4 309 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms